Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.42■□□□□ 0.54
GABRA4P48169 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
GABRA4P48169 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.42■□□□□ 0.54
GABRA4P48169 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
GABRA4P48169 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
GABRA4P48169 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
GABRA4P48169 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
GABRA4P48169 AC096733.2-201ENST00000609937 1394 ntBASIC18.42■□□□□ 0.54
GABRA4P48169 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
GABRA4P48169 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
GABRA4P48169 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
GABRA4P48169 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
GABRA4P48169 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
GABRA4P48169 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
GABRA4P48169 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.41■□□□□ 0.54
GABRA4P48169 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.41■□□□□ 0.54
GABRA4P48169 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
GABRA4P48169 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.41■□□□□ 0.54
GABRA4P48169 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
GABRA4P48169 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
GABRA4P48169 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
GABRA4P48169 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
GABRA4P48169 FAM207BP-201ENST00000447172 505 ntBASIC18.41■□□□□ 0.54
GABRA4P48169 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.41■□□□□ 0.54
GABRA4P48169 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
GABRA4P48169 AC145285.6-201ENST00000604632 637 ntBASIC18.41■□□□□ 0.54
GABRA4P48169 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.41■□□□□ 0.54
GABRA4P48169 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
GABRA4P48169 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
GABRA4P48169 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
GABRA4P48169 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
GABRA4P48169 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.41■□□□□ 0.54
GABRA4P48169 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
GABRA4P48169 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.41■□□□□ 0.54
GABRA4P48169 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
GABRA4P48169 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
GABRA4P48169 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
GABRA4P48169 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.4■□□□□ 0.54
GABRA4P48169 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.4■□□□□ 0.54
GABRA4P48169 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GABRA4P48169 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.4■□□□□ 0.54
GABRA4P48169 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GABRA4P48169 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
GABRA4P48169 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GABRA4P48169 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
GABRA4P48169 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.4■□□□□ 0.54
GABRA4P48169 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.4■□□□□ 0.54
GABRA4P48169 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GABRA4P48169 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.4■□□□□ 0.54
GABRA4P48169 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.4■□□□□ 0.54
GABRA4P48169 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GABRA4P48169 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.4■□□□□ 0.54
GABRA4P48169 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
GABRA4P48169 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.4■□□□□ 0.54
GABRA4P48169 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
GABRA4P48169 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
GABRA4P48169 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.4■□□□□ 0.54
GABRA4P48169 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.4■□□□□ 0.54
GABRA4P48169 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
GABRA4P48169 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.4■□□□□ 0.54
GABRA4P48169 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GABRA4P48169 ZNF815P-204ENST00000434898 1737 ntBASIC18.4■□□□□ 0.54
GABRA4P48169 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
GABRA4P48169 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
GABRA4P48169 TREX1-205ENST00000625293 1783 ntBASIC18.4■□□□□ 0.54
GABRA4P48169 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.39■□□□□ 0.54
GABRA4P48169 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
GABRA4P48169 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
GABRA4P48169 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
GABRA4P48169 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
GABRA4P48169 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.39■□□□□ 0.53
GABRA4P48169 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
GABRA4P48169 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
GABRA4P48169 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.39■□□□□ 0.53
GABRA4P48169 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.39■□□□□ 0.53
GABRA4P48169 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
GABRA4P48169 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
GABRA4P48169 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
GABRA4P48169 CRYGFP-201ENST00000418459 633 ntBASIC18.39■□□□□ 0.53
GABRA4P48169 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.39■□□□□ 0.53
GABRA4P48169 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.39■□□□□ 0.53
GABRA4P48169 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.39■□□□□ 0.53
GABRA4P48169 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.39■□□□□ 0.53
GABRA4P48169 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
GABRA4P48169 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.39■□□□□ 0.53
GABRA4P48169 NAPSB-206ENST00000562112 1266 ntBASIC18.39■□□□□ 0.53
GABRA4P48169 SLC25A1P4-201ENST00000567977 778 ntBASIC18.39■□□□□ 0.53
GABRA4P48169 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
GABRA4P48169 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
GABRA4P48169 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
GABRA4P48169 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
GABRA4P48169 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
GABRA4P48169 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
GABRA4P48169 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
GABRA4P48169 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
GABRA4P48169 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
GABRA4P48169 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
GABRA4P48169 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
GABRA4P48169 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
GABRA4P48169 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms