Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC21.43■■□□□ 1.02
RFC5P40937 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC21.43■■□□□ 1.02
RFC5P40937 AP005242.2-201ENST00000580065 1175 ntBASIC21.43■■□□□ 1.02
RFC5P40937 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
RFC5P40937 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
RFC5P40937 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
RFC5P40937 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC21.43■■□□□ 1.02
RFC5P40937 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RFC5P40937 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC21.43■■□□□ 1.02
RFC5P40937 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RFC5P40937 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
RFC5P40937 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RFC5P40937 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
RFC5P40937 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RFC5P40937 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.43■■□□□ 1.02
RFC5P40937 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RFC5P40937 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RFC5P40937 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RFC5P40937 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RFC5P40937 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RFC5P40937 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RFC5P40937 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RFC5P40937 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC21.42■■□□□ 1.02
RFC5P40937 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
RFC5P40937 DERL1-203ENST00000419562 918 ntTSL 2 BASIC21.42■■□□□ 1.02
RFC5P40937 AC008040.2-201ENST00000461049 708 ntBASIC21.42■■□□□ 1.02
RFC5P40937 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC21.42■■□□□ 1.02
RFC5P40937 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
RFC5P40937 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC21.42■■□□□ 1.02
RFC5P40937 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC21.42■■□□□ 1.02
RFC5P40937 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
RFC5P40937 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
RFC5P40937 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RFC5P40937 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
RFC5P40937 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC21.41■■□□□ 1.02
RFC5P40937 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
RFC5P40937 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.41■■□□□ 1.02
RFC5P40937 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RFC5P40937 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC21.41■■□□□ 1.02
RFC5P40937 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC21.41■■□□□ 1.02
RFC5P40937 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC21.41■■□□□ 1.02
RFC5P40937 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RFC5P40937 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RFC5P40937 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
RFC5P40937 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RFC5P40937 FAM207BP-201ENST00000447172 505 ntBASIC21.41■■□□□ 1.02
RFC5P40937 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC21.41■■□□□ 1.02
RFC5P40937 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC21.41■■□□□ 1.02
RFC5P40937 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC21.41■■□□□ 1.02
RFC5P40937 LINC01023-201ENST00000606054 436 ntBASIC21.41■■□□□ 1.02
RFC5P40937 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC21.41■■□□□ 1.02
RFC5P40937 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC21.41■■□□□ 1.02
RFC5P40937 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RFC5P40937 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
RFC5P40937 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RFC5P40937 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RFC5P40937 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21.41■■□□□ 1.02
RFC5P40937 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
RFC5P40937 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RFC5P40937 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC21.4■■□□□ 1.02
RFC5P40937 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC21.4■■□□□ 1.02
RFC5P40937 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.4■■□□□ 1.02
RFC5P40937 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
RFC5P40937 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RFC5P40937 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC21.4■■□□□ 1.02
RFC5P40937 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RFC5P40937 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RFC5P40937 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RFC5P40937 AL390955.1-201ENST00000428694 934 ntBASIC21.4■■□□□ 1.02
RFC5P40937 AC097488.1-201ENST00000507834 756 ntBASIC21.4■■□□□ 1.02
RFC5P40937 AC133561.5-201ENST00000635547 218 ntBASIC21.4■■□□□ 1.02
RFC5P40937 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
RFC5P40937 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.4■■□□□ 1.02
RFC5P40937 ZNF815P-204ENST00000434898 1737 ntBASIC21.4■■□□□ 1.02
RFC5P40937 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RFC5P40937 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC21.4■■□□□ 1.02
RFC5P40937 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RFC5P40937 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
RFC5P40937 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC21.4■■□□□ 1.02
RFC5P40937 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RFC5P40937 KRT8P41-201ENST00000533985 1514 ntBASIC21.39■■□□□ 1.02
RFC5P40937 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC21.39■■□□□ 1.02
RFC5P40937 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
RFC5P40937 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
RFC5P40937 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC21.39■■□□□ 1.01
RFC5P40937 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RFC5P40937 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RFC5P40937 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC21.39■■□□□ 1.01
RFC5P40937 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC21.39■■□□□ 1.01
RFC5P40937 AC097493.4-201ENST00000641197 219 ntBASIC21.39■■□□□ 1.01
RFC5P40937 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RFC5P40937 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RFC5P40937 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.39■■□□□ 1.01
RFC5P40937 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC21.39■■□□□ 1.01
RFC5P40937 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RFC5P40937 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
RFC5P40937 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RFC5P40937 KRT8P9-201ENST00000558927 1449 ntBASIC21.38■■□□□ 1.01
RFC5P40937 AC104417.2-201ENST00000562989 1793 ntBASIC21.38■■□□□ 1.01
RFC5P40937 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms