Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
COL15A1P39059 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC24.64■■□□□ 1.53
COL15A1P39059 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
COL15A1P39059 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC24.63■■□□□ 1.53
COL15A1P39059 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC24.63■■□□□ 1.53
COL15A1P39059 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
COL15A1P39059 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
COL15A1P39059 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC24.63■■□□□ 1.53
COL15A1P39059 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
COL15A1P39059 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC24.63■■□□□ 1.53
COL15A1P39059 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC24.63■■□□□ 1.53
COL15A1P39059 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC24.63■■□□□ 1.53
COL15A1P39059 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
COL15A1P39059 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
COL15A1P39059 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC24.63■■□□□ 1.53
COL15A1P39059 GOLGA2P11-201ENST00000562660 1621 ntBASIC24.63■■□□□ 1.53
COL15A1P39059 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC24.63■■□□□ 1.53
COL15A1P39059 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
COL15A1P39059 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
COL15A1P39059 AL157384.1-201ENST00000445995 2473 ntBASIC24.62■■□□□ 1.53
COL15A1P39059 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
COL15A1P39059 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC24.62■■□□□ 1.53
COL15A1P39059 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
COL15A1P39059 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
COL15A1P39059 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
COL15A1P39059 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC24.62■■□□□ 1.53
COL15A1P39059 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
COL15A1P39059 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC24.62■■□□□ 1.53
COL15A1P39059 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC24.62■■□□□ 1.53
COL15A1P39059 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC24.62■■□□□ 1.53
COL15A1P39059 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC24.62■■□□□ 1.53
COL15A1P39059 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
COL15A1P39059 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
COL15A1P39059 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC24.61■■□□□ 1.53
COL15A1P39059 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC24.61■■□□□ 1.53
COL15A1P39059 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
COL15A1P39059 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
COL15A1P39059 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC24.61■■□□□ 1.53
COL15A1P39059 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
COL15A1P39059 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
COL15A1P39059 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
COL15A1P39059 KRT18P38-201ENST00000449496 1282 ntBASIC24.61■■□□□ 1.53
COL15A1P39059 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC24.61■■□□□ 1.53
COL15A1P39059 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC24.61■■□□□ 1.53
COL15A1P39059 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC24.61■■□□□ 1.53
COL15A1P39059 AL031432.5-201ENST00000641059 760 ntBASIC24.61■■□□□ 1.53
COL15A1P39059 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
COL15A1P39059 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC24.61■■□□□ 1.53
COL15A1P39059 AC009237.14-201ENST00000609975 1594 ntBASIC24.61■■□□□ 1.53
COL15A1P39059 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
COL15A1P39059 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC24.61■■□□□ 1.53
COL15A1P39059 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
COL15A1P39059 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
COL15A1P39059 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
COL15A1P39059 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC24.6■■□□□ 1.53
COL15A1P39059 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
COL15A1P39059 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
COL15A1P39059 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC24.6■■□□□ 1.53
COL15A1P39059 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
COL15A1P39059 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC24.6■■□□□ 1.53
COL15A1P39059 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
COL15A1P39059 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
COL15A1P39059 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
COL15A1P39059 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC24.6■■□□□ 1.53
COL15A1P39059 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC24.6■■□□□ 1.53
COL15A1P39059 AC005332.1-201ENST00000577698 1310 ntBASIC24.6■■□□□ 1.53
COL15A1P39059 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
COL15A1P39059 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
COL15A1P39059 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC24.6■■□□□ 1.53
COL15A1P39059 AC099778.1-201ENST00000568593 1911 ntBASIC24.6■■□□□ 1.53
COL15A1P39059 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
COL15A1P39059 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
COL15A1P39059 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
COL15A1P39059 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
COL15A1P39059 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
COL15A1P39059 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
COL15A1P39059 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
COL15A1P39059 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
COL15A1P39059 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
COL15A1P39059 KRT18P48-201ENST00000434763 852 ntBASIC24.59■■□□□ 1.53
COL15A1P39059 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
COL15A1P39059 DUSP5P1-201ENST00000441325 1139 ntBASIC24.59■■□□□ 1.53
COL15A1P39059 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC24.59■■□□□ 1.53
COL15A1P39059 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC24.59■■□□□ 1.53
COL15A1P39059 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
COL15A1P39059 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC24.59■■□□□ 1.53
COL15A1P39059 KRT126P-201ENST00000549467 1181 ntBASIC24.59■■□□□ 1.53
COL15A1P39059 ETFA-216ENST00000560726 942 ntTSL 3 BASIC24.59■■□□□ 1.53
COL15A1P39059 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC24.59■■□□□ 1.53
COL15A1P39059 AC093458.2-201ENST00000623150 629 ntBASIC24.59■■□□□ 1.53
COL15A1P39059 AL691432.2-201ENST00000607222 2038 ntBASIC24.59■■□□□ 1.53
COL15A1P39059 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
COL15A1P39059 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
COL15A1P39059 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
COL15A1P39059 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC24.58■■□□□ 1.53
COL15A1P39059 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
COL15A1P39059 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC24.58■■□□□ 1.53
COL15A1P39059 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
COL15A1P39059 KRT8P45-201ENST00000414328 1447 ntBASIC24.58■■□□□ 1.53
COL15A1P39059 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms