Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
COL8A2P25067 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
COL8A2P25067 FITM1-202ENST00000559294 800 ntBASIC16.38■□□□□ 0.21
COL8A2P25067 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.38■□□□□ 0.21
COL8A2P25067 AC130371.2-201ENST00000619443 611 ntBASIC16.38■□□□□ 0.21
COL8A2P25067 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.38■□□□□ 0.21
COL8A2P25067 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
COL8A2P25067 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COL8A2P25067 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.38■□□□□ 0.21
COL8A2P25067 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COL8A2P25067 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COL8A2P25067 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COL8A2P25067 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
COL8A2P25067 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
COL8A2P25067 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC16.38■□□□□ 0.21
COL8A2P25067 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
COL8A2P25067 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
COL8A2P25067 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.37■□□□□ 0.21
COL8A2P25067 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
COL8A2P25067 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
COL8A2P25067 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
COL8A2P25067 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
COL8A2P25067 CYP2D8P-201ENST00000433633 1490 ntBASIC16.37■□□□□ 0.21
COL8A2P25067 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
COL8A2P25067 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
COL8A2P25067 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.37■□□□□ 0.21
COL8A2P25067 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
COL8A2P25067 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.37■□□□□ 0.21
COL8A2P25067 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.37■□□□□ 0.21
COL8A2P25067 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
COL8A2P25067 AC026271.3-201ENST00000571884 352 ntBASIC16.37■□□□□ 0.21
COL8A2P25067 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.37■□□□□ 0.21
COL8A2P25067 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.37■□□□□ 0.21
COL8A2P25067 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
COL8A2P25067 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
COL8A2P25067 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
COL8A2P25067 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
COL8A2P25067 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
COL8A2P25067 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
COL8A2P25067 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
COL8A2P25067 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
COL8A2P25067 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
COL8A2P25067 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
COL8A2P25067 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
COL8A2P25067 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
COL8A2P25067 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
COL8A2P25067 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
COL8A2P25067 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
COL8A2P25067 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC16.36■□□□□ 0.21
COL8A2P25067 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
COL8A2P25067 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
COL8A2P25067 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
COL8A2P25067 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
COL8A2P25067 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
COL8A2P25067 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.36■□□□□ 0.21
COL8A2P25067 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.36■□□□□ 0.21
COL8A2P25067 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
COL8A2P25067 FAM210CP-201ENST00000445714 574 ntBASIC16.36■□□□□ 0.21
COL8A2P25067 AC008040.2-201ENST00000461049 708 ntBASIC16.36■□□□□ 0.21
COL8A2P25067 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.36■□□□□ 0.21
COL8A2P25067 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.36■□□□□ 0.21
COL8A2P25067 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.36■□□□□ 0.21
COL8A2P25067 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.36■□□□□ 0.21
COL8A2P25067 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.36■□□□□ 0.21
COL8A2P25067 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.36■□□□□ 0.21
COL8A2P25067 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.36■□□□□ 0.21
COL8A2P25067 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
COL8A2P25067 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
COL8A2P25067 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
COL8A2P25067 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
COL8A2P25067 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
COL8A2P25067 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
COL8A2P25067 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
COL8A2P25067 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.36■□□□□ 0.21
COL8A2P25067 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
COL8A2P25067 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
COL8A2P25067 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
COL8A2P25067 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
COL8A2P25067 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
COL8A2P25067 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
COL8A2P25067 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
COL8A2P25067 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
COL8A2P25067 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
COL8A2P25067 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
COL8A2P25067 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
COL8A2P25067 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
COL8A2P25067 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.35■□□□□ 0.21
COL8A2P25067 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.35■□□□□ 0.21
COL8A2P25067 AC097488.1-201ENST00000507834 756 ntBASIC16.35■□□□□ 0.21
COL8A2P25067 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
COL8A2P25067 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
COL8A2P25067 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
COL8A2P25067 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
COL8A2P25067 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
COL8A2P25067 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
COL8A2P25067 LINC01465-201ENST00000408887 1940 ntBASIC16.35■□□□□ 0.21
COL8A2P25067 TCF3P1-201ENST00000423021 1937 ntBASIC16.35■□□□□ 0.21
COL8A2P25067 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
COL8A2P25067 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.35■□□□□ 0.21
COL8A2P25067 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms