Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.41■□□□□ 0.86
MMP8P22894 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.41■□□□□ 0.86
MMP8P22894 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
MMP8P22894 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.41■□□□□ 0.86
MMP8P22894 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.41■□□□□ 0.86
MMP8P22894 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
MMP8P22894 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
MMP8P22894 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.41■□□□□ 0.86
MMP8P22894 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
MMP8P22894 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
MMP8P22894 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
MMP8P22894 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MMP8P22894 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
MMP8P22894 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
MMP8P22894 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
MMP8P22894 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
MMP8P22894 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.41■□□□□ 0.86
MMP8P22894 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.41■□□□□ 0.86
MMP8P22894 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MMP8P22894 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
MMP8P22894 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MMP8P22894 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MMP8P22894 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MMP8P22894 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MMP8P22894 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
MMP8P22894 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.4■□□□□ 0.86
MMP8P22894 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
MMP8P22894 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MMP8P22894 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.4■□□□□ 0.86
MMP8P22894 KRT16P5-201ENST00000455284 522 ntBASIC20.4■□□□□ 0.86
MMP8P22894 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.4■□□□□ 0.86
MMP8P22894 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
MMP8P22894 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
MMP8P22894 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.4■□□□□ 0.86
MMP8P22894 AC098818.2-201ENST00000564925 2320 ntBASIC20.4■□□□□ 0.86
MMP8P22894 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.4■□□□□ 0.86
MMP8P22894 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
MMP8P22894 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.4■□□□□ 0.86
MMP8P22894 AP000974.1-201ENST00000623909 2387 ntBASIC20.4■□□□□ 0.86
MMP8P22894 HLA-A-209ENST00000638375 975 ntBASIC20.4■□□□□ 0.86
MMP8P22894 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MMP8P22894 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MMP8P22894 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
MMP8P22894 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
MMP8P22894 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
MMP8P22894 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
MMP8P22894 LINC01465-201ENST00000408887 1940 ntBASIC20.39■□□□□ 0.86
MMP8P22894 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.39■□□□□ 0.86
MMP8P22894 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
MMP8P22894 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.39■□□□□ 0.86
MMP8P22894 AC087289.5-201ENST00000586076 3175 ntBASIC20.39■□□□□ 0.85
MMP8P22894 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
MMP8P22894 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.39■□□□□ 0.85
MMP8P22894 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
MMP8P22894 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
MMP8P22894 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
MMP8P22894 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.39■□□□□ 0.85
MMP8P22894 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
MMP8P22894 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.39■□□□□ 0.85
MMP8P22894 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
MMP8P22894 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.39■□□□□ 0.85
MMP8P22894 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
MMP8P22894 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
MMP8P22894 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.39■□□□□ 0.85
MMP8P22894 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.39■□□□□ 0.85
MMP8P22894 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.39■□□□□ 0.85
MMP8P22894 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.39■□□□□ 0.85
MMP8P22894 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.39■□□□□ 0.85
MMP8P22894 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.39■□□□□ 0.85
MMP8P22894 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
MMP8P22894 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
MMP8P22894 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.39■□□□□ 0.85
MMP8P22894 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.39■□□□□ 0.85
MMP8P22894 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
MMP8P22894 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
MMP8P22894 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
MMP8P22894 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
MMP8P22894 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
MMP8P22894 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
MMP8P22894 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
MMP8P22894 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
MMP8P22894 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
MMP8P22894 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MMP8P22894 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
MMP8P22894 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MMP8P22894 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
MMP8P22894 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
MMP8P22894 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
MMP8P22894 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.38■□□□□ 0.85
MMP8P22894 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.38■□□□□ 0.85
MMP8P22894 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
MMP8P22894 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
MMP8P22894 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.38■□□□□ 0.85
MMP8P22894 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.38■□□□□ 0.85
MMP8P22894 AC110285.5-201ENST00000611501 352 ntBASIC20.38■□□□□ 0.85
MMP8P22894 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.38■□□□□ 0.85
MMP8P22894 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
MMP8P22894 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
MMP8P22894 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MMP8P22894 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms