Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
RFX1P22670 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
RFX1P22670 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
RFX1P22670 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RFX1P22670 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RFX1P22670 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.09■□□□□ 0.97
RFX1P22670 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RFX1P22670 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
RFX1P22670 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC21.09■□□□□ 0.97
RFX1P22670 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC21.09■□□□□ 0.97
RFX1P22670 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RFX1P22670 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
RFX1P22670 KRASP1-201ENST00000407852 552 ntBASIC21.09■□□□□ 0.97
RFX1P22670 PPOX-219ENST00000544598 813 ntTSL 2 BASIC21.09■□□□□ 0.97
RFX1P22670 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC21.09■□□□□ 0.97
RFX1P22670 AC124016.1-201ENST00000609552 612 ntBASIC21.09■□□□□ 0.97
RFX1P22670 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RFX1P22670 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RFX1P22670 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC21.09■□□□□ 0.97
RFX1P22670 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
RFX1P22670 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC21.09■□□□□ 0.97
RFX1P22670 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RFX1P22670 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
RFX1P22670 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
RFX1P22670 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RFX1P22670 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
RFX1P22670 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RFX1P22670 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC21.08■□□□□ 0.97
RFX1P22670 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RFX1P22670 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC21.08■□□□□ 0.97
RFX1P22670 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RFX1P22670 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC21.08■□□□□ 0.97
RFX1P22670 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.08■□□□□ 0.97
RFX1P22670 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RFX1P22670 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RFX1P22670 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.08■□□□□ 0.97
RFX1P22670 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
RFX1P22670 MTDHP1-201ENST00000605323 784 ntBASIC21.08■□□□□ 0.97
RFX1P22670 AC110285.5-201ENST00000611501 352 ntBASIC21.08■□□□□ 0.97
RFX1P22670 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC21.08■□□□□ 0.97
RFX1P22670 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.08■□□□□ 0.97
RFX1P22670 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
RFX1P22670 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
RFX1P22670 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC21.08■□□□□ 0.96
RFX1P22670 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
RFX1P22670 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RFX1P22670 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
RFX1P22670 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RFX1P22670 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
RFX1P22670 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC21.08■□□□□ 0.96
RFX1P22670 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
RFX1P22670 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RFX1P22670 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
RFX1P22670 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RFX1P22670 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RFX1P22670 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RFX1P22670 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RFX1P22670 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RFX1P22670 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RFX1P22670 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.07■□□□□ 0.96
RFX1P22670 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
RFX1P22670 ARMC10P1-201ENST00000313754 855 ntBASIC21.07■□□□□ 0.96
RFX1P22670 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
RFX1P22670 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RFX1P22670 TMPOP1-202ENST00000424642 1267 ntBASIC21.07■□□□□ 0.96
RFX1P22670 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RFX1P22670 PRKY-204ENST00000533551 1019 ntBASIC21.07■□□□□ 0.96
RFX1P22670 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC21.07■□□□□ 0.96
RFX1P22670 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC21.07■□□□□ 0.96
RFX1P22670 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
RFX1P22670 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RFX1P22670 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.07■□□□□ 0.96
RFX1P22670 CABP2-204ENST00000636477 941 ntTSL 5 BASIC21.07■□□□□ 0.96
RFX1P22670 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RFX1P22670 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RFX1P22670 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC21.07■□□□□ 0.96
RFX1P22670 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RFX1P22670 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC21.07■□□□□ 0.96
RFX1P22670 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RFX1P22670 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.07■□□□□ 0.96
RFX1P22670 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC21.06■□□□□ 0.96
RFX1P22670 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC21.06■□□□□ 0.96
RFX1P22670 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC21.06■□□□□ 0.96
RFX1P22670 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RFX1P22670 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC21.06■□□□□ 0.96
RFX1P22670 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC21.06■□□□□ 0.96
RFX1P22670 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
RFX1P22670 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC21.06■□□□□ 0.96
RFX1P22670 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC21.06■□□□□ 0.96
RFX1P22670 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RFX1P22670 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RFX1P22670 AL445228.2-201ENST00000605589 952 ntBASIC21.06■□□□□ 0.96
RFX1P22670 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RFX1P22670 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
RFX1P22670 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
RFX1P22670 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
RFX1P22670 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RFX1P22670 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RFX1P22670 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RFX1P22670 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms