Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CAPN3P20807 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
CAPN3P20807 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
CAPN3P20807 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CAPN3P20807 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CAPN3P20807 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CAPN3P20807 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.64■□□□□ 0.57
CAPN3P20807 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CAPN3P20807 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.64■□□□□ 0.57
CAPN3P20807 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CAPN3P20807 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.64■□□□□ 0.57
CAPN3P20807 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.64■□□□□ 0.57
CAPN3P20807 AC141586.3-201ENST00000562166 1838 ntBASIC18.64■□□□□ 0.57
CAPN3P20807 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CAPN3P20807 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CAPN3P20807 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CAPN3P20807 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CAPN3P20807 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CAPN3P20807 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CAPN3P20807 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CAPN3P20807 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CAPN3P20807 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.63■□□□□ 0.57
CAPN3P20807 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.63■□□□□ 0.57
CAPN3P20807 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CAPN3P20807 AC007613.1-201ENST00000572811 2597 ntBASIC18.63■□□□□ 0.57
CAPN3P20807 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.63■□□□□ 0.57
CAPN3P20807 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CAPN3P20807 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.63■□□□□ 0.57
CAPN3P20807 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CAPN3P20807 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.63■□□□□ 0.57
CAPN3P20807 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CAPN3P20807 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CAPN3P20807 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CAPN3P20807 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CAPN3P20807 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CAPN3P20807 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CAPN3P20807 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CAPN3P20807 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CAPN3P20807 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CAPN3P20807 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CAPN3P20807 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CAPN3P20807 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CAPN3P20807 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
CAPN3P20807 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.63■□□□□ 0.57
CAPN3P20807 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CAPN3P20807 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CAPN3P20807 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.62■□□□□ 0.57
CAPN3P20807 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.62■□□□□ 0.57
CAPN3P20807 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.62■□□□□ 0.57
CAPN3P20807 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.62■□□□□ 0.57
CAPN3P20807 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CAPN3P20807 AC104581.1-202ENST00000635932 2618 ntBASIC18.62■□□□□ 0.57
CAPN3P20807 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CAPN3P20807 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CAPN3P20807 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.62■□□□□ 0.57
CAPN3P20807 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.62■□□□□ 0.57
CAPN3P20807 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.62■□□□□ 0.57
CAPN3P20807 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CAPN3P20807 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CAPN3P20807 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.62■□□□□ 0.57
CAPN3P20807 AC116351.2-201ENST00000606540 1585 ntBASIC18.62■□□□□ 0.57
CAPN3P20807 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.62■□□□□ 0.57
CAPN3P20807 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CAPN3P20807 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.62■□□□□ 0.57
CAPN3P20807 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.62■□□□□ 0.57
CAPN3P20807 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CAPN3P20807 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CAPN3P20807 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.62■□□□□ 0.57
CAPN3P20807 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CAPN3P20807 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
CAPN3P20807 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.62■□□□□ 0.57
CAPN3P20807 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CAPN3P20807 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CAPN3P20807 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CAPN3P20807 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CAPN3P20807 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CAPN3P20807 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.61■□□□□ 0.57
CAPN3P20807 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CAPN3P20807 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CAPN3P20807 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CAPN3P20807 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.61■□□□□ 0.57
CAPN3P20807 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CAPN3P20807 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CAPN3P20807 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CAPN3P20807 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CAPN3P20807 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CAPN3P20807 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CAPN3P20807 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CAPN3P20807 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CAPN3P20807 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.61■□□□□ 0.57
CAPN3P20807 RPS2P52-201ENST00000469610 820 ntBASIC18.61■□□□□ 0.57
CAPN3P20807 AC069236.1-201ENST00000604339 616 ntBASIC18.61■□□□□ 0.57
CAPN3P20807 AL589743.5-201ENST00000616611 1050 ntBASIC18.61■□□□□ 0.57
CAPN3P20807 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CAPN3P20807 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CAPN3P20807 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.61■□□□□ 0.57
CAPN3P20807 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CAPN3P20807 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CAPN3P20807 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CAPN3P20807 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms