Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
ERCC2P18074 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ERCC2P18074 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.96■□□□□ 0.79
ERCC2P18074 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ERCC2P18074 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.96■□□□□ 0.79
ERCC2P18074 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ERCC2P18074 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.96■□□□□ 0.79
ERCC2P18074 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ERCC2P18074 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ERCC2P18074 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ERCC2P18074 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ERCC2P18074 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ERCC2P18074 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
ERCC2P18074 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ERCC2P18074 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ERCC2P18074 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.96■□□□□ 0.79
ERCC2P18074 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ERCC2P18074 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.96■□□□□ 0.79
ERCC2P18074 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.96■□□□□ 0.79
ERCC2P18074 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.96■□□□□ 0.79
ERCC2P18074 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
ERCC2P18074 FAM197Y4-202ENST00000622692 608 ntBASIC19.96■□□□□ 0.79
ERCC2P18074 HLA-A-209ENST00000638375 975 ntBASIC19.96■□□□□ 0.79
ERCC2P18074 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ERCC2P18074 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ERCC2P18074 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
ERCC2P18074 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ERCC2P18074 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ERCC2P18074 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.96■□□□□ 0.79
ERCC2P18074 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ERCC2P18074 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ERCC2P18074 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.96■□□□□ 0.79
ERCC2P18074 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.96■□□□□ 0.79
ERCC2P18074 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.96■□□□□ 0.79
ERCC2P18074 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.95■□□□□ 0.79
ERCC2P18074 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.95■□□□□ 0.79
ERCC2P18074 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ERCC2P18074 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
ERCC2P18074 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ERCC2P18074 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
ERCC2P18074 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ERCC2P18074 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.95■□□□□ 0.78
ERCC2P18074 GCSHP5-201ENST00000443090 522 ntBASIC19.95■□□□□ 0.78
ERCC2P18074 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.95■□□□□ 0.78
ERCC2P18074 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.95■□□□□ 0.78
ERCC2P18074 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ERCC2P18074 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
ERCC2P18074 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
ERCC2P18074 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.95■□□□□ 0.78
ERCC2P18074 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.95■□□□□ 0.78
ERCC2P18074 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
ERCC2P18074 LINC01465-201ENST00000408887 1940 ntBASIC19.95■□□□□ 0.78
ERCC2P18074 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.95■□□□□ 0.78
ERCC2P18074 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
ERCC2P18074 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ERCC2P18074 SDHAP1-207ENST00000440850 2000 ntBASIC19.95■□□□□ 0.78
ERCC2P18074 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ERCC2P18074 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ERCC2P18074 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ERCC2P18074 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ERCC2P18074 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
ERCC2P18074 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ERCC2P18074 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ERCC2P18074 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.94■□□□□ 0.78
ERCC2P18074 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ERCC2P18074 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
ERCC2P18074 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
ERCC2P18074 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.94■□□□□ 0.78
ERCC2P18074 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.94■□□□□ 0.78
ERCC2P18074 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.94■□□□□ 0.78
ERCC2P18074 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ERCC2P18074 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.94■□□□□ 0.78
ERCC2P18074 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ERCC2P18074 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
ERCC2P18074 HTR7P1-201ENST00000538670 1336 ntBASIC19.94■□□□□ 0.78
ERCC2P18074 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ERCC2P18074 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ERCC2P18074 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
ERCC2P18074 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ERCC2P18074 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ERCC2P18074 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
ERCC2P18074 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.93■□□□□ 0.78
ERCC2P18074 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.93■□□□□ 0.78
ERCC2P18074 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ERCC2P18074 AL158047.1-201ENST00000445918 881 ntBASIC19.93■□□□□ 0.78
ERCC2P18074 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.93■□□□□ 0.78
ERCC2P18074 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
ERCC2P18074 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.93■□□□□ 0.78
ERCC2P18074 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
ERCC2P18074 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.93■□□□□ 0.78
ERCC2P18074 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
ERCC2P18074 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ERCC2P18074 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
ERCC2P18074 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ERCC2P18074 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.92■□□□□ 0.78
ERCC2P18074 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ERCC2P18074 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ERCC2P18074 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
ERCC2P18074 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ERCC2P18074 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms