Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
COL6A2P12110 AC104417.2-201ENST00000562989 1793 ntBASIC19.15■□□□□ 0.66
COL6A2P12110 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL6A2P12110 MIR663A-201ENST00000385250 93 ntBASIC19.15■□□□□ 0.66
COL6A2P12110 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
COL6A2P12110 DUSP5P2-201ENST00000426873 1033 ntBASIC19.15■□□□□ 0.66
COL6A2P12110 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.15■□□□□ 0.66
COL6A2P12110 YBX1P10-201ENST00000444752 975 ntBASIC19.15■□□□□ 0.66
COL6A2P12110 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.15■□□□□ 0.66
COL6A2P12110 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
COL6A2P12110 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
COL6A2P12110 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL6A2P12110 KRT8P8-201ENST00000434750 1448 ntBASIC19.15■□□□□ 0.66
COL6A2P12110 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
COL6A2P12110 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL6A2P12110 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL6A2P12110 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.15■□□□□ 0.66
COL6A2P12110 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.15■□□□□ 0.66
COL6A2P12110 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.15■□□□□ 0.66
COL6A2P12110 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.15■□□□□ 0.66
COL6A2P12110 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
COL6A2P12110 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
COL6A2P12110 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
COL6A2P12110 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.66
COL6A2P12110 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.66
COL6A2P12110 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.14■□□□□ 0.65
COL6A2P12110 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COL6A2P12110 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL6A2P12110 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
COL6A2P12110 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COL6A2P12110 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.14■□□□□ 0.65
COL6A2P12110 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.14■□□□□ 0.65
COL6A2P12110 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COL6A2P12110 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.14■□□□□ 0.65
COL6A2P12110 AL121906.2-201ENST00000621597 723 ntBASIC19.14■□□□□ 0.65
COL6A2P12110 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL6A2P12110 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL6A2P12110 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL6A2P12110 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COL6A2P12110 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COL6A2P12110 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL6A2P12110 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.14■□□□□ 0.65
COL6A2P12110 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL6A2P12110 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL6A2P12110 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL6A2P12110 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.13■□□□□ 0.65
COL6A2P12110 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COL6A2P12110 AC120498.9-201ENST00000339021 3867 ntBASIC19.13■□□□□ 0.65
COL6A2P12110 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COL6A2P12110 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL6A2P12110 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.13■□□□□ 0.65
COL6A2P12110 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COL6A2P12110 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL6A2P12110 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
COL6A2P12110 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL6A2P12110 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.13■□□□□ 0.65
COL6A2P12110 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.13■□□□□ 0.65
COL6A2P12110 AC091874.3-201ENST00000512672 1195 ntBASIC19.13■□□□□ 0.65
COL6A2P12110 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COL6A2P12110 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.13■□□□□ 0.65
COL6A2P12110 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.13■□□□□ 0.65
COL6A2P12110 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.13■□□□□ 0.65
COL6A2P12110 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.13■□□□□ 0.65
COL6A2P12110 AL121832.2-201ENST00000610979 668 ntBASIC19.13■□□□□ 0.65
COL6A2P12110 AC006557.6-201ENST00000623071 864 ntBASIC19.13■□□□□ 0.65
COL6A2P12110 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.13■□□□□ 0.65
COL6A2P12110 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
COL6A2P12110 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.13■□□□□ 0.65
COL6A2P12110 AP006587.1-201ENST00000534129 1502 ntBASIC19.13■□□□□ 0.65
COL6A2P12110 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COL6A2P12110 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL6A2P12110 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.13■□□□□ 0.65
COL6A2P12110 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
COL6A2P12110 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
COL6A2P12110 AL049812.1-201ENST00000432563 2267 ntBASIC19.13■□□□□ 0.65
COL6A2P12110 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL6A2P12110 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL6A2P12110 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL6A2P12110 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL6A2P12110 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.12■□□□□ 0.65
COL6A2P12110 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL6A2P12110 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
COL6A2P12110 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.12■□□□□ 0.65
COL6A2P12110 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COL6A2P12110 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL6A2P12110 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL6A2P12110 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL6A2P12110 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.12■□□□□ 0.65
COL6A2P12110 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL6A2P12110 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL6A2P12110 CROCCP5-201ENST00000436658 830 ntBASIC19.12■□□□□ 0.65
COL6A2P12110 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.12■□□□□ 0.65
COL6A2P12110 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.12■□□□□ 0.65
COL6A2P12110 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
COL6A2P12110 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL6A2P12110 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.12■□□□□ 0.65
COL6A2P12110 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL6A2P12110 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COL6A2P12110 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.12■□□□□ 0.65
COL6A2P12110 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms