Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.63■□□□□ 0.41
FREM3P0C091 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.63■□□□□ 0.41
FREM3P0C091 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
FREM3P0C091 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
FREM3P0C091 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
FREM3P0C091 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
FREM3P0C091 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
FREM3P0C091 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
FREM3P0C091 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
FREM3P0C091 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
FREM3P0C091 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
FREM3P0C091 AC026271.3-201ENST00000571884 352 ntBASIC17.62■□□□□ 0.41
FREM3P0C091 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
FREM3P0C091 MIR6786-201ENST00000616843 113 ntBASIC17.62■□□□□ 0.41
FREM3P0C091 AL445675.2-201ENST00000620291 557 ntBASIC17.62■□□□□ 0.41
FREM3P0C091 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.62■□□□□ 0.41
FREM3P0C091 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
FREM3P0C091 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
FREM3P0C091 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
FREM3P0C091 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
FREM3P0C091 AC211429.1-201ENST00000415277 523 ntBASIC17.62■□□□□ 0.41
FREM3P0C091 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.62■□□□□ 0.41
FREM3P0C091 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.62■□□□□ 0.41
FREM3P0C091 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.62■□□□□ 0.41
FREM3P0C091 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
FREM3P0C091 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.62■□□□□ 0.41
FREM3P0C091 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.62■□□□□ 0.41
FREM3P0C091 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
FREM3P0C091 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
FREM3P0C091 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.61■□□□□ 0.41
FREM3P0C091 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
FREM3P0C091 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
FREM3P0C091 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.61■□□□□ 0.41
FREM3P0C091 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.61■□□□□ 0.41
FREM3P0C091 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
FREM3P0C091 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.61■□□□□ 0.41
FREM3P0C091 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
FREM3P0C091 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.61■□□□□ 0.41
FREM3P0C091 AL355355.2-201ENST00000442321 338 ntBASIC17.61■□□□□ 0.41
FREM3P0C091 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.61■□□□□ 0.41
FREM3P0C091 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
FREM3P0C091 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
FREM3P0C091 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
FREM3P0C091 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
FREM3P0C091 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
FREM3P0C091 AC007952.6-201ENST00000573168 2673 ntBASIC17.61■□□□□ 0.41
FREM3P0C091 AC003957.1-201ENST00000625108 2673 ntBASIC17.61■□□□□ 0.41
FREM3P0C091 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
FREM3P0C091 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
FREM3P0C091 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
FREM3P0C091 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
FREM3P0C091 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
FREM3P0C091 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
FREM3P0C091 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.6■□□□□ 0.41
FREM3P0C091 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.6■□□□□ 0.41
FREM3P0C091 AC026471.5-201ENST00000615068 467 ntBASIC17.6■□□□□ 0.41
FREM3P0C091 AC133561.5-201ENST00000635547 218 ntBASIC17.6■□□□□ 0.41
FREM3P0C091 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
FREM3P0C091 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
FREM3P0C091 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC17.6■□□□□ 0.41
FREM3P0C091 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.6■□□□□ 0.41
FREM3P0C091 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
FREM3P0C091 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
FREM3P0C091 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
FREM3P0C091 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
FREM3P0C091 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
FREM3P0C091 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
FREM3P0C091 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
FREM3P0C091 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
FREM3P0C091 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.6■□□□□ 0.41
FREM3P0C091 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
FREM3P0C091 AC012306.2-201ENST00000609350 630 ntBASIC17.6■□□□□ 0.41
FREM3P0C091 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
FREM3P0C091 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.6■□□□□ 0.41
FREM3P0C091 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
FREM3P0C091 LINC01465-201ENST00000408887 1940 ntBASIC17.6■□□□□ 0.41
FREM3P0C091 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.6■□□□□ 0.41
FREM3P0C091 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
FREM3P0C091 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
FREM3P0C091 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
FREM3P0C091 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
FREM3P0C091 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
FREM3P0C091 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
FREM3P0C091 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
FREM3P0C091 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC17.59■□□□□ 0.41
FREM3P0C091 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
FREM3P0C091 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.59■□□□□ 0.41
FREM3P0C091 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
FREM3P0C091 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.59■□□□□ 0.41
FREM3P0C091 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
FREM3P0C091 RBM17P1-201ENST00000453646 1190 ntBASIC17.59■□□□□ 0.41
FREM3P0C091 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
FREM3P0C091 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
FREM3P0C091 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
FREM3P0C091 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC17.59■□□□□ 0.41
FREM3P0C091 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
FREM3P0C091 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
FREM3P0C091 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
FREM3P0C091 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.59■□□□□ 0.41
FREM3P0C091 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms