Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CD48P09326 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CD48P09326 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.1■□□□□ 0.81
CD48P09326 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CD48P09326 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CD48P09326 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.1■□□□□ 0.81
CD48P09326 KRT17P3-201ENST00000420566 1262 ntBASIC20.1■□□□□ 0.81
CD48P09326 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.1■□□□□ 0.81
CD48P09326 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
CD48P09326 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
CD48P09326 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CD48P09326 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CD48P09326 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CD48P09326 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CD48P09326 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.1■□□□□ 0.81
CD48P09326 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.1■□□□□ 0.81
CD48P09326 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CD48P09326 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.09■□□□□ 0.81
CD48P09326 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CD48P09326 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CD48P09326 AL049812.1-201ENST00000432563 2267 ntBASIC20.09■□□□□ 0.81
CD48P09326 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CD48P09326 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CD48P09326 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CD48P09326 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CD48P09326 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CD48P09326 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
CD48P09326 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CD48P09326 NBPF21P-201ENST00000425093 1451 ntBASIC20.09■□□□□ 0.81
CD48P09326 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CD48P09326 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.08■□□□□ 0.81
CD48P09326 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
CD48P09326 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.08■□□□□ 0.81
CD48P09326 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
CD48P09326 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.08■□□□□ 0.81
CD48P09326 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.08■□□□□ 0.81
CD48P09326 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CD48P09326 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.08■□□□□ 0.81
CD48P09326 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CD48P09326 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.08■□□□□ 0.81
CD48P09326 PRKY-204ENST00000533551 1019 ntBASIC20.08■□□□□ 0.81
CD48P09326 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.08■□□□□ 0.81
CD48P09326 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CD48P09326 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CD48P09326 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.08■□□□□ 0.81
CD48P09326 AL023875.1-201ENST00000640777 796 ntBASIC20.08■□□□□ 0.81
CD48P09326 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.08■□□□□ 0.8
CD48P09326 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.8
CD48P09326 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
CD48P09326 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
CD48P09326 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
CD48P09326 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CD48P09326 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CD48P09326 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CD48P09326 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
CD48P09326 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.07■□□□□ 0.8
CD48P09326 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CD48P09326 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CD48P09326 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CD48P09326 TNXA-203ENST00000507684 2038 ntBASIC20.07■□□□□ 0.8
CD48P09326 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CD48P09326 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CD48P09326 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CD48P09326 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CD48P09326 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
CD48P09326 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
CD48P09326 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
CD48P09326 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CD48P09326 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.07■□□□□ 0.8
CD48P09326 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.07■□□□□ 0.8
CD48P09326 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.07■□□□□ 0.8
CD48P09326 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CD48P09326 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.07■□□□□ 0.8
CD48P09326 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.07■□□□□ 0.8
CD48P09326 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CD48P09326 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CD48P09326 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CD48P09326 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.07■□□□□ 0.8
CD48P09326 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
CD48P09326 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CD48P09326 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CD48P09326 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CD48P09326 AL161938.1-201ENST00000569833 2180 ntBASIC20.07■□□□□ 0.8
CD48P09326 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CD48P09326 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CD48P09326 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.06■□□□□ 0.8
CD48P09326 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CD48P09326 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CD48P09326 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CD48P09326 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.06■□□□□ 0.8
CD48P09326 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
CD48P09326 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CD48P09326 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CD48P09326 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CD48P09326 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CD48P09326 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.06■□□□□ 0.8
CD48P09326 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
CD48P09326 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CD48P09326 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.06■□□□□ 0.8
CD48P09326 CD99P1-205ENST00000527459 561 ntBASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms