Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
MT-ND3P03897 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.72■□□□□ 0.75
MT-ND3P03897 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MT-ND3P03897 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
MT-ND3P03897 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MT-ND3P03897 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MT-ND3P03897 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.71■□□□□ 0.75
MT-ND3P03897 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MT-ND3P03897 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.71■□□□□ 0.75
MT-ND3P03897 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MT-ND3P03897 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MT-ND3P03897 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MT-ND3P03897 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
MT-ND3P03897 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MT-ND3P03897 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MT-ND3P03897 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
MT-ND3P03897 MCRIP2P1-201ENST00000394346 511 ntBASIC19.71■□□□□ 0.75
MT-ND3P03897 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
MT-ND3P03897 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MT-ND3P03897 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
MT-ND3P03897 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.71■□□□□ 0.75
MT-ND3P03897 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.71■□□□□ 0.75
MT-ND3P03897 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.71■□□□□ 0.75
MT-ND3P03897 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.71■□□□□ 0.75
MT-ND3P03897 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.71■□□□□ 0.75
MT-ND3P03897 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
MT-ND3P03897 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
MT-ND3P03897 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MT-ND3P03897 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
MT-ND3P03897 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
MT-ND3P03897 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.71■□□□□ 0.75
MT-ND3P03897 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MT-ND3P03897 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MT-ND3P03897 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MT-ND3P03897 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.7■□□□□ 0.74
MT-ND3P03897 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MT-ND3P03897 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
MT-ND3P03897 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
MT-ND3P03897 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MT-ND3P03897 PHGDH-210ENST00000641115 1638 ntBASIC19.7■□□□□ 0.74
MT-ND3P03897 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
MT-ND3P03897 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
MT-ND3P03897 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MT-ND3P03897 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
MT-ND3P03897 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MT-ND3P03897 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
MT-ND3P03897 DUSP5P2-201ENST00000426873 1033 ntBASIC19.7■□□□□ 0.74
MT-ND3P03897 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.7■□□□□ 0.74
MT-ND3P03897 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.7■□□□□ 0.74
MT-ND3P03897 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.7■□□□□ 0.74
MT-ND3P03897 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.7■□□□□ 0.74
MT-ND3P03897 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
MT-ND3P03897 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
MT-ND3P03897 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
MT-ND3P03897 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
MT-ND3P03897 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
MT-ND3P03897 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
MT-ND3P03897 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
MT-ND3P03897 NEFHP1-201ENST00000412845 2629 ntBASIC19.7■□□□□ 0.74
MT-ND3P03897 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MT-ND3P03897 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.69■□□□□ 0.74
MT-ND3P03897 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
MT-ND3P03897 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
MT-ND3P03897 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
MT-ND3P03897 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.69■□□□□ 0.74
MT-ND3P03897 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MT-ND3P03897 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
MT-ND3P03897 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
MT-ND3P03897 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
MT-ND3P03897 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.69■□□□□ 0.74
MT-ND3P03897 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.69■□□□□ 0.74
MT-ND3P03897 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.69■□□□□ 0.74
MT-ND3P03897 AC083880.1-201ENST00000608266 535 ntBASIC19.69■□□□□ 0.74
MT-ND3P03897 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
MT-ND3P03897 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MT-ND3P03897 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MT-ND3P03897 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MT-ND3P03897 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MT-ND3P03897 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
MT-ND3P03897 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
MT-ND3P03897 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MT-ND3P03897 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.68■□□□□ 0.74
MT-ND3P03897 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
MT-ND3P03897 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
MT-ND3P03897 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MT-ND3P03897 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
MT-ND3P03897 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MT-ND3P03897 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
MT-ND3P03897 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.68■□□□□ 0.74
MT-ND3P03897 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
MT-ND3P03897 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.68■□□□□ 0.74
MT-ND3P03897 AC066615.1-201ENST00000640911 628 ntBASIC19.68■□□□□ 0.74
MT-ND3P03897 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MT-ND3P03897 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
MT-ND3P03897 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.68■□□□□ 0.74
MT-ND3P03897 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
MT-ND3P03897 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.68■□□□□ 0.74
MT-ND3P03897 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.68■□□□□ 0.74
MT-ND3P03897 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
MT-ND3P03897 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms