Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
CD4P01730 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CD4P01730 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CD4P01730 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.43■■□□□ 1.02
CD4P01730 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CD4P01730 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CD4P01730 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CD4P01730 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CD4P01730 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
CD4P01730 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CD4P01730 AL450487.1-201ENST00000426799 995 ntBASIC21.43■■□□□ 1.02
CD4P01730 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC21.43■■□□□ 1.02
CD4P01730 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC21.43■■□□□ 1.02
CD4P01730 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC21.43■■□□□ 1.02
CD4P01730 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CD4P01730 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC21.43■■□□□ 1.02
CD4P01730 ETFA-216ENST00000560726 942 ntTSL 3 BASIC21.43■■□□□ 1.02
CD4P01730 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC21.43■■□□□ 1.02
CD4P01730 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.43■■□□□ 1.02
CD4P01730 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CD4P01730 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC21.43■■□□□ 1.02
CD4P01730 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CD4P01730 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CD4P01730 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CD4P01730 AC073314.1-201ENST00000568729 2216 ntBASIC21.43■■□□□ 1.02
CD4P01730 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CD4P01730 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CD4P01730 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CD4P01730 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CD4P01730 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
CD4P01730 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CD4P01730 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CD4P01730 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CD4P01730 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
CD4P01730 DAP-202ENST00000432074 1048 ntTSL 2 BASIC21.42■■□□□ 1.02
CD4P01730 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC21.42■■□□□ 1.02
CD4P01730 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
CD4P01730 PTK2-216ENST00000519881 863 ntTSL 3 BASIC21.42■■□□□ 1.02
CD4P01730 CD81-212ENST00000526072 1172 ntTSL 5 BASIC21.42■■□□□ 1.02
CD4P01730 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CD4P01730 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CD4P01730 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CD4P01730 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.42■■□□□ 1.02
CD4P01730 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CD4P01730 AL160286.2-201ENST00000567150 934 ntBASIC21.42■■□□□ 1.02
CD4P01730 AP005212.1-201ENST00000581547 1997 ntBASIC21.42■■□□□ 1.02
CD4P01730 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.42■■□□□ 1.02
CD4P01730 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
CD4P01730 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CD4P01730 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
CD4P01730 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CD4P01730 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CD4P01730 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CD4P01730 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CD4P01730 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CD4P01730 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CD4P01730 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CD4P01730 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CD4P01730 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
CD4P01730 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CD4P01730 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CD4P01730 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CD4P01730 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC21.41■■□□□ 1.02
CD4P01730 NME1-207ENST00000480143 964 ntTSL 2 BASIC21.41■■□□□ 1.02
CD4P01730 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC21.41■■□□□ 1.02
CD4P01730 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC21.41■■□□□ 1.02
CD4P01730 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CD4P01730 AP003041.3-201ENST00000527151 707 ntBASIC21.41■■□□□ 1.02
CD4P01730 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
CD4P01730 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
CD4P01730 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC21.41■■□□□ 1.02
CD4P01730 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC21.41■■□□□ 1.02
CD4P01730 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CD4P01730 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.41■■□□□ 1.02
CD4P01730 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CD4P01730 FEM1AP1-201ENST00000431297 1995 ntBASIC21.41■■□□□ 1.02
CD4P01730 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
CD4P01730 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.41■■□□□ 1.02
CD4P01730 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CD4P01730 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.41■■□□□ 1.02
CD4P01730 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CD4P01730 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CD4P01730 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CD4P01730 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
CD4P01730 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.4■■□□□ 1.02
CD4P01730 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
CD4P01730 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CD4P01730 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CD4P01730 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CD4P01730 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CD4P01730 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CD4P01730 AC026396.1-201ENST00000419388 421 ntBASIC21.4■■□□□ 1.02
CD4P01730 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CD4P01730 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC21.4■■□□□ 1.02
CD4P01730 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC21.4■■□□□ 1.02
CD4P01730 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC21.4■■□□□ 1.02
CD4P01730 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC21.4■■□□□ 1.02
CD4P01730 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CD4P01730 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
CD4P01730 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms