Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.54■□□□□ 0.72
PDGFBP01127 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDGFBP01127 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDGFBP01127 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC19.54■□□□□ 0.72
PDGFBP01127 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC19.54■□□□□ 0.72
PDGFBP01127 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PDGFBP01127 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
PDGFBP01127 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.54■□□□□ 0.72
PDGFBP01127 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
PDGFBP01127 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.53■□□□□ 0.72
PDGFBP01127 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDGFBP01127 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDGFBP01127 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.53■□□□□ 0.72
PDGFBP01127 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.53■□□□□ 0.72
PDGFBP01127 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDGFBP01127 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDGFBP01127 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDGFBP01127 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.53■□□□□ 0.72
PDGFBP01127 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC19.53■□□□□ 0.72
PDGFBP01127 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC19.53■□□□□ 0.72
PDGFBP01127 FOSL1P1-201ENST00000511041 816 ntBASIC19.53■□□□□ 0.72
PDGFBP01127 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.53■□□□□ 0.72
PDGFBP01127 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.53■□□□□ 0.72
PDGFBP01127 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.53■□□□□ 0.72
PDGFBP01127 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.53■□□□□ 0.72
PDGFBP01127 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PDGFBP01127 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDGFBP01127 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDGFBP01127 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.52■□□□□ 0.72
PDGFBP01127 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
PDGFBP01127 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.52■□□□□ 0.72
PDGFBP01127 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PDGFBP01127 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.52■□□□□ 0.72
PDGFBP01127 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PDGFBP01127 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDGFBP01127 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDGFBP01127 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.52■□□□□ 0.72
PDGFBP01127 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDGFBP01127 AP000867.3-201ENST00000524675 377 ntBASIC19.52■□□□□ 0.72
PDGFBP01127 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PDGFBP01127 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.52■□□□□ 0.72
PDGFBP01127 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDGFBP01127 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC19.52■□□□□ 0.72
PDGFBP01127 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.52■□□□□ 0.72
PDGFBP01127 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.52■□□□□ 0.72
PDGFBP01127 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PDGFBP01127 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDGFBP01127 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
PDGFBP01127 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PDGFBP01127 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
PDGFBP01127 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDGFBP01127 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDGFBP01127 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
PDGFBP01127 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDGFBP01127 KRT18P13-201ENST00000400056 1290 ntBASIC19.51■□□□□ 0.71
PDGFBP01127 RPP21-221ENST00000428040 594 ntTSL 2 BASIC19.51■□□□□ 0.71
PDGFBP01127 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDGFBP01127 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PDGFBP01127 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.51■□□□□ 0.71
PDGFBP01127 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PDGFBP01127 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
PDGFBP01127 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
PDGFBP01127 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDGFBP01127 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDGFBP01127 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDGFBP01127 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
PDGFBP01127 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.51■□□□□ 0.71
PDGFBP01127 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDGFBP01127 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.51■□□□□ 0.71
PDGFBP01127 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PDGFBP01127 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDGFBP01127 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
PDGFBP01127 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PDGFBP01127 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDGFBP01127 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.5■□□□□ 0.71
PDGFBP01127 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
PDGFBP01127 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PDGFBP01127 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDGFBP01127 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.5■□□□□ 0.71
PDGFBP01127 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.5■□□□□ 0.71
PDGFBP01127 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDGFBP01127 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDGFBP01127 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDGFBP01127 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
PDGFBP01127 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC19.5■□□□□ 0.71
PDGFBP01127 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC19.5■□□□□ 0.71
PDGFBP01127 CHCHD2P8-201ENST00000429873 447 ntBASIC19.5■□□□□ 0.71
PDGFBP01127 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.5■□□□□ 0.71
PDGFBP01127 KRT8P26-201ENST00000534154 1276 ntBASIC19.5■□□□□ 0.71
PDGFBP01127 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.5■□□□□ 0.71
PDGFBP01127 AL121772.3-201ENST00000610840 674 ntBASIC19.5■□□□□ 0.71
PDGFBP01127 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDGFBP01127 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
PDGFBP01127 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDGFBP01127 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.5■□□□□ 0.71
PDGFBP01127 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDGFBP01127 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.49■□□□□ 0.71
PDGFBP01127 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.49■□□□□ 0.71
PDGFBP01127 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDGFBP01127 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms