Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
ALDH1A1P00352 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
ALDH1A1P00352 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
ALDH1A1P00352 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
ALDH1A1P00352 BUB3-202ENST00000368859 667 ntTSL 3 BASIC22.17■■□□□ 1.14
ALDH1A1P00352 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC22.17■■□□□ 1.14
ALDH1A1P00352 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
ALDH1A1P00352 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC22.17■■□□□ 1.14
ALDH1A1P00352 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
ALDH1A1P00352 CHCHD2P8-201ENST00000429873 447 ntBASIC22.17■■□□□ 1.14
ALDH1A1P00352 AC106795.1-205ENST00000512851 1056 ntBASIC22.17■■□□□ 1.14
ALDH1A1P00352 AL662844.1-201ENST00000546340 181 ntBASIC22.17■■□□□ 1.14
ALDH1A1P00352 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
ALDH1A1P00352 CASK-201ENST00000378154 2494 ntTSL 5 BASIC22.17■■□□□ 1.14
ALDH1A1P00352 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC22.17■■□□□ 1.14
ALDH1A1P00352 AC092720.2-201ENST00000602388 1665 ntBASIC22.17■■□□□ 1.14
ALDH1A1P00352 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
ALDH1A1P00352 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
ALDH1A1P00352 KRT8P11-201ENST00000409686 1436 ntBASIC22.16■■□□□ 1.14
ALDH1A1P00352 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
ALDH1A1P00352 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC22.16■■□□□ 1.14
ALDH1A1P00352 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
ALDH1A1P00352 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
ALDH1A1P00352 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
ALDH1A1P00352 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
ALDH1A1P00352 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC22.16■■□□□ 1.14
ALDH1A1P00352 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC22.16■■□□□ 1.14
ALDH1A1P00352 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
ALDH1A1P00352 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
ALDH1A1P00352 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
ALDH1A1P00352 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
ALDH1A1P00352 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
ALDH1A1P00352 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
ALDH1A1P00352 LINC01465-201ENST00000408887 1940 ntBASIC22.16■■□□□ 1.14
ALDH1A1P00352 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
ALDH1A1P00352 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC22.15■■□□□ 1.14
ALDH1A1P00352 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC22.15■■□□□ 1.14
ALDH1A1P00352 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
ALDH1A1P00352 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
ALDH1A1P00352 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
ALDH1A1P00352 KRT18P1-202ENST00000452408 1331 ntBASIC22.15■■□□□ 1.14
ALDH1A1P00352 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
ALDH1A1P00352 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
ALDH1A1P00352 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC22.15■■□□□ 1.14
ALDH1A1P00352 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC22.15■■□□□ 1.14
ALDH1A1P00352 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
ALDH1A1P00352 ILF2-202ENST00000368681 726 ntTSL 2 BASIC22.15■■□□□ 1.14
ALDH1A1P00352 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC22.15■■□□□ 1.14
ALDH1A1P00352 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC22.15■■□□□ 1.14
ALDH1A1P00352 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC22.15■■□□□ 1.14
ALDH1A1P00352 AC117500.6-201ENST00000624871 588 ntBASIC22.15■■□□□ 1.14
ALDH1A1P00352 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC22.15■■□□□ 1.14
ALDH1A1P00352 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
ALDH1A1P00352 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC22.15■■□□□ 1.14
ALDH1A1P00352 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC22.14■■□□□ 1.14
ALDH1A1P00352 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
ALDH1A1P00352 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC22.14■■□□□ 1.14
ALDH1A1P00352 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
ALDH1A1P00352 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
ALDH1A1P00352 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
ALDH1A1P00352 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC22.14■■□□□ 1.13
ALDH1A1P00352 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC22.14■■□□□ 1.13
ALDH1A1P00352 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC22.14■■□□□ 1.13
ALDH1A1P00352 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
ALDH1A1P00352 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
ALDH1A1P00352 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC22.14■■□□□ 1.13
ALDH1A1P00352 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
ALDH1A1P00352 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC22.14■■□□□ 1.13
ALDH1A1P00352 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC22.14■■□□□ 1.13
ALDH1A1P00352 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC22.14■■□□□ 1.13
ALDH1A1P00352 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
ALDH1A1P00352 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
ALDH1A1P00352 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
ALDH1A1P00352 AC093525.10-201ENST00000625130 1569 ntBASIC22.13■■□□□ 1.13
ALDH1A1P00352 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
ALDH1A1P00352 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC22.13■■□□□ 1.13
ALDH1A1P00352 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC22.13■■□□□ 1.13
ALDH1A1P00352 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
ALDH1A1P00352 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
ALDH1A1P00352 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
ALDH1A1P00352 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC22.13■■□□□ 1.13
ALDH1A1P00352 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC22.13■■□□□ 1.13
ALDH1A1P00352 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC22.13■■□□□ 1.13
ALDH1A1P00352 AL732292.2-201ENST00000609649 430 ntBASIC22.13■■□□□ 1.13
ALDH1A1P00352 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC22.13■■□□□ 1.13
ALDH1A1P00352 AL117328.2-201ENST00000624617 1940 ntBASIC22.13■■□□□ 1.13
ALDH1A1P00352 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
ALDH1A1P00352 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
ALDH1A1P00352 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC22.13■■□□□ 1.13
ALDH1A1P00352 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
ALDH1A1P00352 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC22.12■■□□□ 1.13
ALDH1A1P00352 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
ALDH1A1P00352 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC22.12■■□□□ 1.13
ALDH1A1P00352 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
ALDH1A1P00352 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
ALDH1A1P00352 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
ALDH1A1P00352 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC22.12■■□□□ 1.13
ALDH1A1P00352 AC079781.3-201ENST00000449110 356 ntBASIC22.12■■□□□ 1.13
ALDH1A1P00352 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC22.12■■□□□ 1.13
ALDH1A1P00352 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC22.12■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms