Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.03■□□□□ 0.64
CPNE6O95741 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.03■□□□□ 0.64
CPNE6O95741 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.03■□□□□ 0.64
CPNE6O95741 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.03■□□□□ 0.64
CPNE6O95741 AC092720.2-201ENST00000602388 1665 ntBASIC19.03■□□□□ 0.64
CPNE6O95741 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CPNE6O95741 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.03■□□□□ 0.64
CPNE6O95741 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.03■□□□□ 0.64
CPNE6O95741 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.03■□□□□ 0.64
CPNE6O95741 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.03■□□□□ 0.64
CPNE6O95741 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CPNE6O95741 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CPNE6O95741 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CPNE6O95741 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.03■□□□□ 0.64
CPNE6O95741 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
CPNE6O95741 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CPNE6O95741 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.02■□□□□ 0.64
CPNE6O95741 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CPNE6O95741 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.64
CPNE6O95741 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CPNE6O95741 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.64
CPNE6O95741 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CPNE6O95741 AL512408.1-201ENST00000569378 2000 ntBASIC19.02■□□□□ 0.64
CPNE6O95741 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CPNE6O95741 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CPNE6O95741 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CPNE6O95741 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.02■□□□□ 0.64
CPNE6O95741 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.02■□□□□ 0.64
CPNE6O95741 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.02■□□□□ 0.64
CPNE6O95741 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CPNE6O95741 AC116562.2-201ENST00000507042 360 ntBASIC19.02■□□□□ 0.64
CPNE6O95741 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.02■□□□□ 0.64
CPNE6O95741 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.02■□□□□ 0.64
CPNE6O95741 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.02■□□□□ 0.64
CPNE6O95741 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.02■□□□□ 0.64
CPNE6O95741 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CPNE6O95741 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CPNE6O95741 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CPNE6O95741 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CPNE6O95741 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.02■□□□□ 0.63
CPNE6O95741 AC099778.1-201ENST00000568593 1911 ntBASIC19.02■□□□□ 0.63
CPNE6O95741 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPNE6O95741 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CPNE6O95741 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CPNE6O95741 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPNE6O95741 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CPNE6O95741 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPNE6O95741 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPNE6O95741 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPNE6O95741 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.01■□□□□ 0.63
CPNE6O95741 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPNE6O95741 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
CPNE6O95741 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPNE6O95741 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CPNE6O95741 AP000525.1-201ENST00000608286 694 ntBASIC19.01■□□□□ 0.63
CPNE6O95741 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPNE6O95741 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPNE6O95741 TNXA-203ENST00000507684 2038 ntBASIC19.01■□□□□ 0.63
CPNE6O95741 AC079598.2-202ENST00000546624 1451 ntBASIC19.01■□□□□ 0.63
CPNE6O95741 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CPNE6O95741 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPNE6O95741 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CPNE6O95741 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPNE6O95741 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPNE6O95741 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
CPNE6O95741 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19■□□□□ 0.63
CPNE6O95741 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19■□□□□ 0.63
CPNE6O95741 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CPNE6O95741 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19■□□□□ 0.63
CPNE6O95741 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19■□□□□ 0.63
CPNE6O95741 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19■□□□□ 0.63
CPNE6O95741 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
CPNE6O95741 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CPNE6O95741 RCN1P1-201ENST00000400413 996 ntBASIC19■□□□□ 0.63
CPNE6O95741 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19■□□□□ 0.63
CPNE6O95741 YBX1P10-201ENST00000444752 975 ntBASIC19■□□□□ 0.63
CPNE6O95741 TK2-213ENST00000563369 882 ntTSL 5 BASIC19■□□□□ 0.63
CPNE6O95741 C1QL1P1-201ENST00000568105 661 ntBASIC19■□□□□ 0.63
CPNE6O95741 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19■□□□□ 0.63
CPNE6O95741 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CPNE6O95741 TFP1-202ENST00000475455 1573 ntBASIC19■□□□□ 0.63
CPNE6O95741 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
CPNE6O95741 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CPNE6O95741 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CPNE6O95741 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CPNE6O95741 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
CPNE6O95741 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19■□□□□ 0.63
CPNE6O95741 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19■□□□□ 0.63
CPNE6O95741 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CPNE6O95741 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19■□□□□ 0.63
CPNE6O95741 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19■□□□□ 0.63
CPNE6O95741 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CPNE6O95741 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19■□□□□ 0.63
CPNE6O95741 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
CPNE6O95741 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19■□□□□ 0.63
CPNE6O95741 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CPNE6O95741 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CPNE6O95741 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.99■□□□□ 0.63
CPNE6O95741 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CPNE6O95741 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms