Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SIX6O95475 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
SIX6O95475 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
SIX6O95475 KRT16P2-201ENST00000414673 1423 ntBASIC16.21■□□□□ 0.19
SIX6O95475 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SIX6O95475 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SIX6O95475 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SIX6O95475 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
SIX6O95475 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SIX6O95475 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SIX6O95475 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SIX6O95475 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SIX6O95475 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC16.21■□□□□ 0.19
SIX6O95475 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SIX6O95475 AL512631.2-201ENST00000604634 923 ntBASIC16.21■□□□□ 0.19
SIX6O95475 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SIX6O95475 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SIX6O95475 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.21■□□□□ 0.19
SIX6O95475 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SIX6O95475 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SIX6O95475 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SIX6O95475 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.21■□□□□ 0.18
SIX6O95475 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SIX6O95475 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.21■□□□□ 0.18
SIX6O95475 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
SIX6O95475 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.21■□□□□ 0.18
SIX6O95475 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.21■□□□□ 0.18
SIX6O95475 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
SIX6O95475 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SIX6O95475 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
SIX6O95475 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.2■□□□□ 0.18
SIX6O95475 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SIX6O95475 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.2■□□□□ 0.18
SIX6O95475 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.2■□□□□ 0.18
SIX6O95475 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SIX6O95475 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.2■□□□□ 0.18
SIX6O95475 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.2■□□□□ 0.18
SIX6O95475 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SIX6O95475 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SIX6O95475 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SIX6O95475 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC16.2■□□□□ 0.18
SIX6O95475 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC16.2■□□□□ 0.18
SIX6O95475 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SIX6O95475 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SIX6O95475 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.2■□□□□ 0.18
SIX6O95475 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SIX6O95475 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SIX6O95475 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SIX6O95475 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SIX6O95475 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SIX6O95475 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SIX6O95475 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SIX6O95475 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SIX6O95475 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SIX6O95475 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
SIX6O95475 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SIX6O95475 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC16.19■□□□□ 0.18
SIX6O95475 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SIX6O95475 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.19■□□□□ 0.18
SIX6O95475 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SIX6O95475 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
SIX6O95475 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SIX6O95475 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SIX6O95475 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.19■□□□□ 0.18
SIX6O95475 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SIX6O95475 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SIX6O95475 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SIX6O95475 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SIX6O95475 BCL2-203ENST00000589955 5011 ntBASIC16.19■□□□□ 0.18
SIX6O95475 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SIX6O95475 AC093525.10-201ENST00000625130 1569 ntBASIC16.19■□□□□ 0.18
SIX6O95475 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SIX6O95475 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SIX6O95475 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.19■□□□□ 0.18
SIX6O95475 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.19■□□□□ 0.18
SIX6O95475 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
SIX6O95475 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.19■□□□□ 0.18
SIX6O95475 AC141586.3-201ENST00000562166 1838 ntBASIC16.19■□□□□ 0.18
SIX6O95475 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
SIX6O95475 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SIX6O95475 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.18■□□□□ 0.18
SIX6O95475 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SIX6O95475 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SIX6O95475 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SIX6O95475 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC16.18■□□□□ 0.18
SIX6O95475 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SIX6O95475 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SIX6O95475 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SIX6O95475 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SIX6O95475 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SIX6O95475 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.18■□□□□ 0.18
SIX6O95475 AP001271.2-201ENST00000624018 1556 ntBASIC16.18■□□□□ 0.18
SIX6O95475 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SIX6O95475 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SIX6O95475 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.18■□□□□ 0.18
SIX6O95475 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SIX6O95475 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SIX6O95475 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
SIX6O95475 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC16.18■□□□□ 0.18
SIX6O95475 IGHV3-19-201ENST00000521488 291 ntBASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms