Protein–RNA interactions for Protein: O75940

SMNDC1, Survival of motor neuron-related-splicing factor 30, humanhuman

Known RBP eCLIP

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1O75940 PKD1P6-203ENST00000538100 705 ntTSL 318.82■□□□□ 0.61e-5■■□□□ 11.9
SMNDC1O75940 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.571e-5■■□□□ 11.9
SMNDC1O75940 PPP1R12C-206ENST00000590268 830 ntTSL 218.12■□□□□ 0.491e-5■■□□□ 11.9
SMNDC1O75940 RNASEH2A-202ENST00000590121 859 ntTSL 218.09■□□□□ 0.491e-5■■□□□ 11.9
SMNDC1O75940 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.94■□□□□ 0.461e-5■■□□□ 11.9
SMNDC1O75940 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.431e-5■■□□□ 11.9
SMNDC1O75940 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.411e-5■■□□□ 11.9
SMNDC1O75940 SYNGR2-205ENST00000589183 796 ntTSL 316.64■□□□□ 0.251e-5■■□□□ 11.9
SMNDC1O75940 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.221e-5■■□□□ 11.9
SMNDC1O75940 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.21e-5■■□□□ 11.9
SMNDC1O75940 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.161e-5■■□□□ 11.9
SMNDC1O75940 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.151e-5■■□□□ 11.9
SMNDC1O75940 PGGHG-208ENST00000529087 745 ntTSL 216■□□□□ 0.151e-5■■□□□ 11.9
SMNDC1O75940 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.141e-5■■□□□ 11.9
SMNDC1O75940 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.121e-5■■□□□ 11.9
SMNDC1O75940 KMT5A-209ENST00000537270 352 ntTSL 515.62■□□□□ 0.091e-5■■□□□ 11.9
SMNDC1O75940 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.41■□□□□ 0.061e-5■■□□□ 11.9
SMNDC1O75940 RAN-205ENST00000477395 762 ntTSL 515.27■□□□□ 0.041e-5■■□□□ 11.9
SMNDC1O75940 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.031e-5■■□□□ 11.9
SMNDC1O75940 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.021e-5■■□□□ 11.9
SMNDC1O75940 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.09■□□□□ 0.011e-5■■□□□ 11.9
SMNDC1O75940 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -01e-5■■□□□ 11.9
SMNDC1O75940 PGGHG-205ENST00000474221 4418 ntTSL 214.87□□□□□ -0.031e-5■■□□□ 11.9
SMNDC1O75940 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.79□□□□□ -0.041e-5■■□□□ 11.9
SMNDC1O75940 FRS2-207ENST00000550169 570 ntTSL 314.71□□□□□ -0.051e-5■■□□□ 11.9
SMNDC1O75940 PGGHG-207ENST00000482937 734 ntTSL 514.71□□□□□ -0.051e-5■■□□□ 11.9
SMNDC1O75940 FRS2-202ENST00000547219 611 ntTSL 514.71□□□□□ -0.051e-5■■□□□ 11.9
SMNDC1O75940 RNASEH2A-204ENST00000593017 1487 ntTSL 214.65□□□□□ -0.061e-5■■□□□ 11.9
SMNDC1O75940 SYNGR2-208ENST00000591770 864 ntTSL 214.52□□□□□ -0.091e-5■■□□□ 11.9
SMNDC1O75940 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC14.42□□□□□ -0.11e-5■■□□□ 11.9
SMNDC1O75940 RNASEH2A-205ENST00000639767 647 ntTSL 514.12□□□□□ -0.151e-5■■□□□ 11.9
SMNDC1O75940 INCENP-206ENST00000533896 570 ntTSL 414.05□□□□□ -0.161e-5■■□□□ 11.9
SMNDC1O75940 PLK4-209ENST00000513090 3123 ntTSL 2 BASIC13.55□□□□□ -0.241e-5■■□□□ 11.9
SMNDC1O75940 GSE1-213ENST00000568080 289 ntTSL 513.41□□□□□ -0.261e-5■■□□□ 11.9
SMNDC1O75940 UROD-219ENST00000494399 1848 ntTSL 213.23□□□□□ -0.291e-5■■□□□ 11.9
SMNDC1O75940 UROD-208ENST00000463092 968 ntTSL 213.2□□□□□ -0.31e-5■■□□□ 11.9
SMNDC1O75940 PGGHG-202ENST00000409479 3062 ntTSL 5 BASIC13.12□□□□□ -0.311e-5■■□□□ 11.9
SMNDC1O75940 PLK4-203ENST00000507249 3195 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.311e-5■■□□□ 11.9
SMNDC1O75940 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.321e-5■■□□□ 11.9
SMNDC1O75940 PLK4-210ENST00000514379 3060 ntTSL 2 BASIC13.04□□□□□ -0.321e-5■■□□□ 11.9
SMNDC1O75940 RAN-210ENST00000541630 1475 ntTSL 2 BASIC12.95□□□□□ -0.341e-5■■□□□ 11.9
SMNDC1O75940 PGGHG-203ENST00000409548 3687 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.351e-5■■□□□ 11.9
SMNDC1O75940 SYNGR2-209ENST00000592456 3036 nt12.62□□□□□ -0.391e-5■■□□□ 11.9
SMNDC1O75940 UROD-218ENST00000491773 676 ntTSL 212.58□□□□□ -0.41e-5■■□□□ 11.9
SMNDC1O75940 FRS2-204ENST00000548154 597 ntTSL 212.5□□□□□ -0.411e-5■■□□□ 11.9
SMNDC1O75940 PILRB-203ENST00000431140 772 ntTSL 312.39□□□□□ -0.431e-5■■□□□ 11.9
SMNDC1O75940 AMDHD2-204ENST00000561487 701 ntTSL 212.34□□□□□ -0.431e-5■■□□□ 11.9
SMNDC1O75940 UROD-205ENST00000460906 820 ntTSL 512.12□□□□□ -0.471e-5■■□□□ 11.9
SMNDC1O75940 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC12.12□□□□□ -0.471e-5■■□□□ 11.9
SMNDC1O75940 FRS2-208ENST00000550316 545 ntTSL 512.08□□□□□ -0.481e-5■■□□□ 11.9
SMNDC1O75940 CUX1-204ENST00000393824 2331 ntTSL 2 BASIC12.08□□□□□ -0.481e-5■■□□□ 11.9
SMNDC1O75940 FRS2-210ENST00000550937 781 ntTSL 512.04□□□□□ -0.481e-5■■□□□ 11.9
SMNDC1O75940 FRS2-203ENST00000547414 521 ntTSL 512.04□□□□□ -0.481e-5■■□□□ 11.9
SMNDC1O75940 FRS2-205ENST00000549092 584 ntTSL 412.02□□□□□ -0.491e-5■■□□□ 11.9
SMNDC1O75940 PLK4-211ENST00000515069 3431 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.51e-5■■□□□ 11.9
SMNDC1O75940 KMT5A-204ENST00000437519 1774 ntTSL 211.91□□□□□ -0.51e-5■■□□□ 11.9
SMNDC1O75940 UROD-214ENST00000478467 857 ntTSL 311.8□□□□□ -0.521e-5■■□□□ 11.9
SMNDC1O75940 PLK4-201ENST00000270861 3841 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.551e-5■■□□□ 11.9
SMNDC1O75940 UROD-207ENST00000462688 901 ntTSL 511.24□□□□□ -0.611e-5■■□□□ 11.9
SMNDC1O75940 CUX1-202ENST00000292538 2930 ntTSL 1 (best) BASIC11.19□□□□□ -0.621e-5■■□□□ 11.9
SMNDC1O75940 UROD-213ENST00000473012 632 ntTSL 311.09□□□□□ -0.631e-5■■□□□ 11.9
SMNDC1O75940 CUX1-212ENST00000547394 2878 ntTSL 2 BASIC10.86□□□□□ -0.671e-5■■□□□ 11.9
SMNDC1O75940 CUX1-205ENST00000425244 2776 ntTSL 2 BASIC10.85□□□□□ -0.671e-5■■□□□ 11.9
SMNDC1O75940 CUX1-210ENST00000497815 947 ntTSL 210.58□□□□□ -0.721e-5■■□□□ 11.9
SMNDC1O75940 CUX1-221ENST00000622516 2990 ntTSL 1 (best) BASIC10.51□□□□□ -0.731e-5■■□□□ 11.9
SMNDC1O75940 UROD-215ENST00000486699 968 ntTSL 310.5□□□□□ -0.731e-5■■□□□ 11.9
SMNDC1O75940 FADS1-211ENST00000536991 2701 ntTSL 2 BASIC10.44□□□□□ -0.741e-5■■□□□ 11.9
SMNDC1O75940 UROD-221ENST00000636293 1102 ntTSL 5 BASIC10.43□□□□□ -0.741e-5■■□□□ 11.9
SMNDC1O75940 UROD-222ENST00000636836 1173 ntTSL 5 BASIC10.38□□□□□ -0.751e-5■■□□□ 11.9
SMNDC1O75940 UROD-211ENST00000469548 1044 ntTSL 210.33□□□□□ -0.761e-5■■□□□ 11.9
SMNDC1O75940 UROD-220ENST00000496439 800 ntTSL 210.08□□□□□ -0.81e-5■■□□□ 11.9
SMNDC1O75940 UROD-217ENST00000491300 884 ntTSL 59.89□□□□□ -0.831e-5■■□□□ 11.9
SMNDC1O75940 UROD-203ENST00000434478 600 ntTSL 39.88□□□□□ -0.831e-5■■□□□ 11.9
SMNDC1O75940 CUX1-203ENST00000360264 13762 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.851e-5■■□□□ 11.9
SMNDC1O75940 PTTG1-203ENST00000517480 684 ntTSL 59.61□□□□□ -0.871e-5■■□□□ 11.9
SMNDC1O75940 RAN-208ENST00000537745 1065 ntTSL 1 (best)9.59□□□□□ -0.871e-5■■□□□ 11.9
SMNDC1O75940 CUX1-206ENST00000437600 3031 ntTSL 1 (best) BASIC9.59□□□□□ -0.871e-5■■□□□ 11.9
SMNDC1O75940 CUX1-201ENST00000292535 13747 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.891e-5■■□□□ 11.9
SMNDC1O75940 FADS1-210ENST00000496123 693 ntTSL 59.43□□□□□ -0.91e-5■■□□□ 11.9
SMNDC1O75940 RAN-207ENST00000536606 572 ntTSL 39.07□□□□□ -0.961e-5■■□□□ 11.9
SMNDC1O75940 UROD-216ENST00000490385 860 ntTSL 59.06□□□□□ -0.961e-5■■□□□ 11.9
SMNDC1O75940 UROD-202ENST00000428106 682 ntTSL 39.02□□□□□ -0.971e-5■■□□□ 11.9
SMNDC1O75940 PLK4-207ENST00000510605 637 ntTSL 38.83□□□□□ -11e-5■■□□□ 11.9
SMNDC1O75940 AL359921.1-201ENST00000433131 494 ntTSL 3 BASIC8.52□□□□□ -1.051e-5■■□□□ 11.9
SMNDC1O75940 UROD-204ENST00000460334 663 ntTSL 58.4□□□□□ -1.061e-5■■□□□ 11.9
SMNDC1O75940 RAN-204ENST00000464211 562 ntTSL 58.21□□□□□ -1.11e-5■■□□□ 11.9
SMNDC1O75940 PTTG1-206ENST00000523659 851 ntTSL 27.99□□□□□ -1.131e-5■■□□□ 11.9
SMNDC1O75940 RAN-211ENST00000541679 572 ntTSL 5 BASIC7.8□□□□□ -1.161e-5■■□□□ 11.9
SMNDC1O75940 RAN-201ENST00000392367 780 ntTSL 5 BASIC7.55□□□□□ -1.21e-5■■□□□ 11.9
SMNDC1O75940 RAN-203ENST00000448750 2455 ntTSL 27.36□□□□□ -1.231e-5■■□□□ 11.9
SMNDC1O75940 PLK4-204ENST00000507454 632 ntTSL 27.31□□□□□ -1.241e-5■■□□□ 11.9
SMNDC1O75940 FADS1-213ENST00000539999 405 ntTSL 37.3□□□□□ -1.241e-5■■□□□ 11.9
SMNDC1O75940 PTTG1-201ENST00000352433 753 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.241e-5■■□□□ 11.9
SMNDC1O75940 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.281e-5■■□□□ 11.9
SMNDC1O75940 PTTG1-207ENST00000524244 434 ntTSL 26.99□□□□□ -1.291e-5■■□□□ 11.9
SMNDC1O75940 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.411e-5■■□□□ 11.9
SMNDC1O75940 RAN-206ENST00000535090 657 ntTSL 56.18□□□□□ -1.421e-5■■□□□ 11.9
SMNDC1O75940 CUX1-220ENST00000607092 559 ntTSL 35.71□□□□□ -1.51e-5■■□□□ 11.9
SMNDC1O75940 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.125e-14■■□□□ 11.9
SMNDC1O75940 SRSF5-215ENST00000556587 1863 ntTSL 1 (best)12.7□□□□□ -0.385e-14■■□□□ 11.9
Retrieved 100 of 11,362 protein–RNA pairs in 52.5 ms