Protein–RNA interactions for Protein: O75437

ZNF254, Zinc finger protein 254, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF254O75437 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.17■□□□□ 0.34
ZNF254O75437 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
ZNF254O75437 AC106820.2-201ENST00000563775 3264 ntBASIC17.16■□□□□ 0.34
ZNF254O75437 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF254O75437 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF254O75437 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
ZNF254O75437 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
ZNF254O75437 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF254O75437 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
ZNF254O75437 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF254O75437 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF254O75437 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
ZNF254O75437 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.16■□□□□ 0.34
ZNF254O75437 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC17.16■□□□□ 0.34
ZNF254O75437 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.16■□□□□ 0.34
ZNF254O75437 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.16■□□□□ 0.34
ZNF254O75437 AC105036.2-201ENST00000569468 176 ntBASIC17.16■□□□□ 0.34
ZNF254O75437 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF254O75437 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF254O75437 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.16■□□□□ 0.34
ZNF254O75437 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF254O75437 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.16■□□□□ 0.34
ZNF254O75437 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF254O75437 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.16■□□□□ 0.34
ZNF254O75437 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.16■□□□□ 0.34
ZNF254O75437 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF254O75437 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.16■□□□□ 0.34
ZNF254O75437 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
ZNF254O75437 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ZNF254O75437 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.16■□□□□ 0.34
ZNF254O75437 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.15■□□□□ 0.34
ZNF254O75437 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.15■□□□□ 0.34
ZNF254O75437 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF254O75437 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.15■□□□□ 0.34
ZNF254O75437 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.15■□□□□ 0.34
ZNF254O75437 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
ZNF254O75437 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
ZNF254O75437 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
ZNF254O75437 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF254O75437 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
ZNF254O75437 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.15■□□□□ 0.34
ZNF254O75437 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
ZNF254O75437 BX276092.2-201ENST00000417668 665 ntBASIC17.15■□□□□ 0.34
ZNF254O75437 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
ZNF254O75437 AC005829.2-201ENST00000571422 1056 ntBASIC17.15■□□□□ 0.34
ZNF254O75437 AC073111.5-205ENST00000641717 521 ntBASIC17.15■□□□□ 0.34
ZNF254O75437 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF254O75437 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
ZNF254O75437 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF254O75437 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.15■□□□□ 0.34
ZNF254O75437 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF254O75437 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF254O75437 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF254O75437 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.15■□□□□ 0.34
ZNF254O75437 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
ZNF254O75437 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
ZNF254O75437 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
ZNF254O75437 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
ZNF254O75437 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
ZNF254O75437 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.14■□□□□ 0.33
ZNF254O75437 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF254O75437 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
ZNF254O75437 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF254O75437 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.14■□□□□ 0.33
ZNF254O75437 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC17.14■□□□□ 0.33
ZNF254O75437 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC17.14■□□□□ 0.33
ZNF254O75437 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.14■□□□□ 0.33
ZNF254O75437 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.14■□□□□ 0.33
ZNF254O75437 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.14■□□□□ 0.33
ZNF254O75437 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.14■□□□□ 0.33
ZNF254O75437 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.14■□□□□ 0.33
ZNF254O75437 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF254O75437 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF254O75437 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.14■□□□□ 0.33
ZNF254O75437 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
ZNF254O75437 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
ZNF254O75437 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
ZNF254O75437 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF254O75437 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF254O75437 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF254O75437 AL138781.2-201ENST00000617896 1843 ntBASIC17.14■□□□□ 0.33
ZNF254O75437 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF254O75437 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF254O75437 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF254O75437 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF254O75437 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.14■□□□□ 0.33
ZNF254O75437 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF254O75437 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF254O75437 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF254O75437 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
ZNF254O75437 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
ZNF254O75437 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
ZNF254O75437 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.13■□□□□ 0.33
ZNF254O75437 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF254O75437 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
ZNF254O75437 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.13■□□□□ 0.33
ZNF254O75437 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF254O75437 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF254O75437 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF254O75437 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms