Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
HCN1O60741 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HCN1O60741 AL158211.5-201ENST00000623583 2518 ntBASIC18.12■□□□□ 0.49
HCN1O60741 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
HCN1O60741 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.12■□□□□ 0.49
HCN1O60741 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HCN1O60741 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HCN1O60741 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
HCN1O60741 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
HCN1O60741 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HCN1O60741 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.11■□□□□ 0.49
HCN1O60741 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HCN1O60741 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
HCN1O60741 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
HCN1O60741 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HCN1O60741 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
HCN1O60741 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
HCN1O60741 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.11■□□□□ 0.49
HCN1O60741 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.11■□□□□ 0.49
HCN1O60741 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.11■□□□□ 0.49
HCN1O60741 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.11■□□□□ 0.49
HCN1O60741 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.11■□□□□ 0.49
HCN1O60741 AC124016.1-201ENST00000609552 612 ntBASIC18.11■□□□□ 0.49
HCN1O60741 AL023875.1-201ENST00000640777 796 ntBASIC18.11■□□□□ 0.49
HCN1O60741 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.11■□□□□ 0.49
HCN1O60741 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HCN1O60741 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.11■□□□□ 0.49
HCN1O60741 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
HCN1O60741 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HCN1O60741 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HCN1O60741 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HCN1O60741 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HCN1O60741 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HCN1O60741 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HCN1O60741 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HCN1O60741 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
HCN1O60741 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
HCN1O60741 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HCN1O60741 AC116562.4-201ENST00000641316 2276 ntBASIC18.1■□□□□ 0.49
HCN1O60741 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HCN1O60741 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.1■□□□□ 0.49
HCN1O60741 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.1■□□□□ 0.49
HCN1O60741 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.1■□□□□ 0.49
HCN1O60741 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
HCN1O60741 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HCN1O60741 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HCN1O60741 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
HCN1O60741 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HCN1O60741 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HCN1O60741 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.1■□□□□ 0.49
HCN1O60741 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.1■□□□□ 0.49
HCN1O60741 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
HCN1O60741 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.1■□□□□ 0.49
HCN1O60741 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.1■□□□□ 0.49
HCN1O60741 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
HCN1O60741 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
HCN1O60741 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.1■□□□□ 0.49
HCN1O60741 AC110285.5-201ENST00000611501 352 ntBASIC18.1■□□□□ 0.49
HCN1O60741 AL121829.2-201ENST00000620908 328 ntBASIC18.1■□□□□ 0.49
HCN1O60741 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.1■□□□□ 0.49
HCN1O60741 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HCN1O60741 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.1■□□□□ 0.49
HCN1O60741 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HCN1O60741 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.09■□□□□ 0.49
HCN1O60741 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
HCN1O60741 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HCN1O60741 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HCN1O60741 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.09■□□□□ 0.49
HCN1O60741 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HCN1O60741 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
HCN1O60741 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
HCN1O60741 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HCN1O60741 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.09■□□□□ 0.49
HCN1O60741 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.09■□□□□ 0.49
HCN1O60741 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HCN1O60741 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.09■□□□□ 0.49
HCN1O60741 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.09■□□□□ 0.49
HCN1O60741 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HCN1O60741 TNXA-203ENST00000507684 2038 ntBASIC18.09■□□□□ 0.49
HCN1O60741 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HCN1O60741 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.09■□□□□ 0.49
HCN1O60741 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
HCN1O60741 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.09■□□□□ 0.49
HCN1O60741 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HCN1O60741 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HCN1O60741 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HCN1O60741 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.08■□□□□ 0.49
HCN1O60741 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HCN1O60741 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
HCN1O60741 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.08■□□□□ 0.49
HCN1O60741 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
HCN1O60741 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HCN1O60741 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.08■□□□□ 0.48
HCN1O60741 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
HCN1O60741 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HCN1O60741 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HCN1O60741 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HCN1O60741 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HCN1O60741 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.08■□□□□ 0.48
HCN1O60741 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms