Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LCMT2O60294 AC104417.2-201ENST00000562989 1793 ntBASIC18.56■□□□□ 0.56
LCMT2O60294 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.56■□□□□ 0.56
LCMT2O60294 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LCMT2O60294 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
LCMT2O60294 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.56■□□□□ 0.56
LCMT2O60294 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LCMT2O60294 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
LCMT2O60294 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.56■□□□□ 0.56
LCMT2O60294 RPS2P4-201ENST00000476944 856 ntBASIC18.56■□□□□ 0.56
LCMT2O60294 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.56■□□□□ 0.56
LCMT2O60294 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LCMT2O60294 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.56■□□□□ 0.56
LCMT2O60294 AF186192.3-201ENST00000583427 947 ntBASIC18.56■□□□□ 0.56
LCMT2O60294 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LCMT2O60294 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LCMT2O60294 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.56■□□□□ 0.56
LCMT2O60294 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LCMT2O60294 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.56■□□□□ 0.56
LCMT2O60294 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.56■□□□□ 0.56
LCMT2O60294 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LCMT2O60294 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
LCMT2O60294 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.55■□□□□ 0.56
LCMT2O60294 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
LCMT2O60294 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
LCMT2O60294 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LCMT2O60294 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LCMT2O60294 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.55■□□□□ 0.56
LCMT2O60294 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LCMT2O60294 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.55■□□□□ 0.56
LCMT2O60294 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.55■□□□□ 0.56
LCMT2O60294 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.55■□□□□ 0.56
LCMT2O60294 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.55■□□□□ 0.56
LCMT2O60294 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.55■□□□□ 0.56
LCMT2O60294 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.55■□□□□ 0.56
LCMT2O60294 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.55■□□□□ 0.56
LCMT2O60294 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.55■□□□□ 0.56
LCMT2O60294 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LCMT2O60294 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LCMT2O60294 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LCMT2O60294 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
LCMT2O60294 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.54■□□□□ 0.56
LCMT2O60294 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LCMT2O60294 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LCMT2O60294 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LCMT2O60294 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LCMT2O60294 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.54■□□□□ 0.56
LCMT2O60294 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
LCMT2O60294 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
LCMT2O60294 RPS2P55-201ENST00000397318 883 ntBASIC18.54■□□□□ 0.56
LCMT2O60294 NIFKP9-201ENST00000419265 221 ntBASIC18.54■□□□□ 0.56
LCMT2O60294 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LCMT2O60294 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LCMT2O60294 AP002982.1-201ENST00000492365 877 ntBASIC18.54■□□□□ 0.56
LCMT2O60294 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.54■□□□□ 0.56
LCMT2O60294 AC107956.1-201ENST00000494359 873 ntBASIC18.54■□□□□ 0.56
LCMT2O60294 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.54■□□□□ 0.56
LCMT2O60294 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.54■□□□□ 0.56
LCMT2O60294 AL353708.3-201ENST00000610272 989 ntBASIC18.54■□□□□ 0.56
LCMT2O60294 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.54■□□□□ 0.56
LCMT2O60294 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LCMT2O60294 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
LCMT2O60294 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
LCMT2O60294 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.54■□□□□ 0.56
LCMT2O60294 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LCMT2O60294 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.54■□□□□ 0.56
LCMT2O60294 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LCMT2O60294 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LCMT2O60294 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
LCMT2O60294 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LCMT2O60294 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.53■□□□□ 0.56
LCMT2O60294 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.53■□□□□ 0.56
LCMT2O60294 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LCMT2O60294 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LCMT2O60294 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LCMT2O60294 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LCMT2O60294 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.53■□□□□ 0.56
LCMT2O60294 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
LCMT2O60294 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LCMT2O60294 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.53■□□□□ 0.56
LCMT2O60294 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
LCMT2O60294 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LCMT2O60294 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.53■□□□□ 0.56
LCMT2O60294 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LCMT2O60294 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LCMT2O60294 AC008550.1-201ENST00000511500 884 ntBASIC18.53■□□□□ 0.56
LCMT2O60294 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.53■□□□□ 0.56
LCMT2O60294 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.53■□□□□ 0.56
LCMT2O60294 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LCMT2O60294 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.53■□□□□ 0.56
LCMT2O60294 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LCMT2O60294 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LCMT2O60294 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
LCMT2O60294 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
LCMT2O60294 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LCMT2O60294 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LCMT2O60294 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.53■□□□□ 0.56
LCMT2O60294 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.53■□□□□ 0.56
LCMT2O60294 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.52■□□□□ 0.56
LCMT2O60294 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms