Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.84■□□□□ 0.29
XRCC2O43543 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
XRCC2O43543 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
XRCC2O43543 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
XRCC2O43543 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
XRCC2O43543 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC16.84■□□□□ 0.29
XRCC2O43543 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC16.84■□□□□ 0.29
XRCC2O43543 RNA5SP413-201ENST00000516373 109 ntBASIC16.84■□□□□ 0.29
XRCC2O43543 KLF13-207ENST00000560473 489 ntTSL 3 BASIC16.84■□□□□ 0.29
XRCC2O43543 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
XRCC2O43543 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
XRCC2O43543 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
XRCC2O43543 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
XRCC2O43543 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
XRCC2O43543 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
XRCC2O43543 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
XRCC2O43543 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC16.84■□□□□ 0.29
XRCC2O43543 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC16.84■□□□□ 0.29
XRCC2O43543 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
XRCC2O43543 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
XRCC2O43543 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.29
XRCC2O43543 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
XRCC2O43543 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
XRCC2O43543 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
XRCC2O43543 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
XRCC2O43543 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
XRCC2O43543 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
XRCC2O43543 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
XRCC2O43543 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
XRCC2O43543 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC16.83■□□□□ 0.28
XRCC2O43543 TUBB8P6-201ENST00000436895 1288 ntBASIC16.83■□□□□ 0.28
XRCC2O43543 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.83■□□□□ 0.28
XRCC2O43543 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC16.83■□□□□ 0.28
XRCC2O43543 AP003097.1-201ENST00000530657 1135 ntBASIC16.83■□□□□ 0.28
XRCC2O43543 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.83■□□□□ 0.28
XRCC2O43543 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC16.83■□□□□ 0.28
XRCC2O43543 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
XRCC2O43543 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
XRCC2O43543 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC16.83■□□□□ 0.28
XRCC2O43543 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.83■□□□□ 0.28
XRCC2O43543 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
XRCC2O43543 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC16.83■□□□□ 0.28
XRCC2O43543 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
XRCC2O43543 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
XRCC2O43543 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
XRCC2O43543 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
XRCC2O43543 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC16.82■□□□□ 0.28
XRCC2O43543 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
XRCC2O43543 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC16.82■□□□□ 0.28
XRCC2O43543 AC018445.3-201ENST00000624177 1945 ntBASIC16.82■□□□□ 0.28
XRCC2O43543 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
XRCC2O43543 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
XRCC2O43543 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.82■□□□□ 0.28
XRCC2O43543 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC16.82■□□□□ 0.28
XRCC2O43543 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
XRCC2O43543 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
XRCC2O43543 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
XRCC2O43543 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
XRCC2O43543 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
XRCC2O43543 KRT17P3-201ENST00000420566 1262 ntBASIC16.82■□□□□ 0.28
XRCC2O43543 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC16.82■□□□□ 0.28
XRCC2O43543 KRT18P16-201ENST00000510337 1294 ntBASIC16.82■□□□□ 0.28
XRCC2O43543 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.82■□□□□ 0.28
XRCC2O43543 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC16.82■□□□□ 0.28
XRCC2O43543 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
XRCC2O43543 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC16.82■□□□□ 0.28
XRCC2O43543 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC16.82■□□□□ 0.28
XRCC2O43543 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC16.82■□□□□ 0.28
XRCC2O43543 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
XRCC2O43543 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
XRCC2O43543 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
XRCC2O43543 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
XRCC2O43543 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
XRCC2O43543 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
XRCC2O43543 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.82■□□□□ 0.28
XRCC2O43543 ZNF815P-204ENST00000434898 1737 ntBASIC16.82■□□□□ 0.28
XRCC2O43543 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
XRCC2O43543 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16.81■□□□□ 0.28
XRCC2O43543 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
XRCC2O43543 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
XRCC2O43543 AC098818.2-201ENST00000564925 2320 ntBASIC16.81■□□□□ 0.28
XRCC2O43543 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
XRCC2O43543 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
XRCC2O43543 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
XRCC2O43543 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
XRCC2O43543 AL032819.2-201ENST00000624543 2162 ntBASIC16.81■□□□□ 0.28
XRCC2O43543 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
XRCC2O43543 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
XRCC2O43543 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
XRCC2O43543 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
XRCC2O43543 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.81■□□□□ 0.28
XRCC2O43543 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC16.81■□□□□ 0.28
XRCC2O43543 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
XRCC2O43543 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC16.81■□□□□ 0.28
XRCC2O43543 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
XRCC2O43543 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
XRCC2O43543 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
XRCC2O43543 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
XRCC2O43543 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
XRCC2O43543 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms