Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.1■□□□□ 0.49
AP3D1O14617 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
AP3D1O14617 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
AP3D1O14617 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
AP3D1O14617 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
AP3D1O14617 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
AP3D1O14617 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.1■□□□□ 0.49
AP3D1O14617 AC097658.1-201ENST00000475555 843 ntBASIC18.1■□□□□ 0.49
AP3D1O14617 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
AP3D1O14617 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
AP3D1O14617 AC083880.1-201ENST00000608266 535 ntBASIC18.1■□□□□ 0.49
AP3D1O14617 AC006557.6-201ENST00000623071 864 ntBASIC18.1■□□□□ 0.49
AP3D1O14617 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
AP3D1O14617 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
AP3D1O14617 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
AP3D1O14617 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
AP3D1O14617 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
AP3D1O14617 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
AP3D1O14617 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
AP3D1O14617 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
AP3D1O14617 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
AP3D1O14617 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP3D1O14617 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
AP3D1O14617 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
AP3D1O14617 Z82202.1-201ENST00000623446 1880 ntBASIC18.09■□□□□ 0.49
AP3D1O14617 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP3D1O14617 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.09■□□□□ 0.49
AP3D1O14617 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP3D1O14617 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.09■□□□□ 0.49
AP3D1O14617 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
AP3D1O14617 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP3D1O14617 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.09■□□□□ 0.49
AP3D1O14617 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.09■□□□□ 0.49
AP3D1O14617 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP3D1O14617 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.09■□□□□ 0.49
AP3D1O14617 AC005829.2-201ENST00000571422 1056 ntBASIC18.09■□□□□ 0.49
AP3D1O14617 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP3D1O14617 BCL2-203ENST00000589955 5011 ntBASIC18.09■□□□□ 0.49
AP3D1O14617 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP3D1O14617 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP3D1O14617 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP3D1O14617 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP3D1O14617 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
AP3D1O14617 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
AP3D1O14617 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.08■□□□□ 0.49
AP3D1O14617 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
AP3D1O14617 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
AP3D1O14617 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.08■□□□□ 0.49
AP3D1O14617 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.08■□□□□ 0.49
AP3D1O14617 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
AP3D1O14617 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.08■□□□□ 0.49
AP3D1O14617 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
AP3D1O14617 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
AP3D1O14617 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.08■□□□□ 0.48
AP3D1O14617 HLA-L-209ENST00000420110 1011 ntBASIC18.08■□□□□ 0.48
AP3D1O14617 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.08■□□□□ 0.48
AP3D1O14617 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.08■□□□□ 0.48
AP3D1O14617 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.08■□□□□ 0.48
AP3D1O14617 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.08■□□□□ 0.48
AP3D1O14617 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
AP3D1O14617 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
AP3D1O14617 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
AP3D1O14617 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
AP3D1O14617 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.08■□□□□ 0.48
AP3D1O14617 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.08■□□□□ 0.48
AP3D1O14617 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
AP3D1O14617 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
AP3D1O14617 AC020763.4-201ENST00000623414 4170 ntBASIC18.08■□□□□ 0.48
AP3D1O14617 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
AP3D1O14617 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
AP3D1O14617 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP3D1O14617 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP3D1O14617 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.07■□□□□ 0.48
AP3D1O14617 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP3D1O14617 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
AP3D1O14617 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP3D1O14617 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
AP3D1O14617 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP3D1O14617 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.07■□□□□ 0.48
AP3D1O14617 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
AP3D1O14617 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.07■□□□□ 0.48
AP3D1O14617 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP3D1O14617 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
AP3D1O14617 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.07■□□□□ 0.48
AP3D1O14617 AC090340.1-201ENST00000620778 4980 ntBASIC18.07■□□□□ 0.48
AP3D1O14617 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP3D1O14617 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
AP3D1O14617 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP3D1O14617 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
AP3D1O14617 AL355802.2-201ENST00000402069 882 ntBASIC18.07■□□□□ 0.48
AP3D1O14617 AL390719.1-204ENST00000412397 1219 ntBASIC18.07■□□□□ 0.48
AP3D1O14617 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
AP3D1O14617 AC069152.1-201ENST00000438030 544 ntBASIC18.07■□□□□ 0.48
AP3D1O14617 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.07■□□□□ 0.48
AP3D1O14617 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.07■□□□□ 0.48
AP3D1O14617 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
AP3D1O14617 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.07■□□□□ 0.48
AP3D1O14617 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP3D1O14617 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
AP3D1O14617 AC005082.1-201ENST00000413042 2259 ntBASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms