Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM38O00635 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.51■□□□□ 0.71
TRIM38O00635 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.51■□□□□ 0.71
TRIM38O00635 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM38O00635 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.51■□□□□ 0.71
TRIM38O00635 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM38O00635 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM38O00635 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.5■□□□□ 0.71
TRIM38O00635 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM38O00635 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM38O00635 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM38O00635 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM38O00635 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM38O00635 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
TRIM38O00635 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM38O00635 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM38O00635 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.5■□□□□ 0.71
TRIM38O00635 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.5■□□□□ 0.71
TRIM38O00635 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.5■□□□□ 0.71
TRIM38O00635 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.5■□□□□ 0.71
TRIM38O00635 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.5■□□□□ 0.71
TRIM38O00635 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.5■□□□□ 0.71
TRIM38O00635 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.5■□□□□ 0.71
TRIM38O00635 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.5■□□□□ 0.71
TRIM38O00635 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
TRIM38O00635 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM38O00635 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM38O00635 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.5■□□□□ 0.71
TRIM38O00635 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
TRIM38O00635 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM38O00635 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM38O00635 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM38O00635 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM38O00635 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM38O00635 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM38O00635 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
TRIM38O00635 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM38O00635 AL158211.5-201ENST00000623583 2518 ntBASIC19.49■□□□□ 0.71
TRIM38O00635 MMP23A-201ENST00000234610 1017 ntBASIC19.49■□□□□ 0.71
TRIM38O00635 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.49■□□□□ 0.71
TRIM38O00635 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
TRIM38O00635 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
TRIM38O00635 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM38O00635 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.49■□□□□ 0.71
TRIM38O00635 AC073195.1-201ENST00000607241 877 ntBASIC19.49■□□□□ 0.71
TRIM38O00635 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.49■□□□□ 0.71
TRIM38O00635 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM38O00635 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.49■□□□□ 0.71
TRIM38O00635 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM38O00635 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM38O00635 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM38O00635 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM38O00635 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM38O00635 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM38O00635 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.49■□□□□ 0.71
TRIM38O00635 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.49■□□□□ 0.71
TRIM38O00635 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM38O00635 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
TRIM38O00635 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.49■□□□□ 0.71
TRIM38O00635 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM38O00635 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
TRIM38O00635 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
TRIM38O00635 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
TRIM38O00635 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
TRIM38O00635 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM38O00635 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM38O00635 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM38O00635 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM38O00635 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM38O00635 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM38O00635 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM38O00635 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.48■□□□□ 0.71
TRIM38O00635 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM38O00635 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
TRIM38O00635 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.48■□□□□ 0.71
TRIM38O00635 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.48■□□□□ 0.71
TRIM38O00635 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM38O00635 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
TRIM38O00635 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM38O00635 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
TRIM38O00635 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
TRIM38O00635 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM38O00635 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM38O00635 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM38O00635 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.47■□□□□ 0.71
TRIM38O00635 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
TRIM38O00635 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.47■□□□□ 0.71
TRIM38O00635 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
TRIM38O00635 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
TRIM38O00635 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.47■□□□□ 0.71
TRIM38O00635 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.47■□□□□ 0.71
TRIM38O00635 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.47■□□□□ 0.71
TRIM38O00635 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.47■□□□□ 0.71
TRIM38O00635 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM38O00635 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM38O00635 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM38O00635 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
TRIM38O00635 PTBP1P-201ENST00000554374 1601 ntBASIC19.47■□□□□ 0.71
TRIM38O00635 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM38O00635 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms