Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC20.68■□□□□ 0.9
SOX1O00570 AC098831.1-202ENST00000438821 336 ntBASIC20.68■□□□□ 0.9
SOX1O00570 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC20.68■□□□□ 0.9
SOX1O00570 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SOX1O00570 RPL18-209ENST00000550645 463 ntTSL 5 BASIC20.68■□□□□ 0.9
SOX1O00570 RPL18-214ENST00000552588 559 ntTSL 3 BASIC20.68■□□□□ 0.9
SOX1O00570 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC20.68■□□□□ 0.9
SOX1O00570 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SOX1O00570 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SOX1O00570 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SOX1O00570 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
SOX1O00570 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SOX1O00570 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.67■□□□□ 0.9
SOX1O00570 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SOX1O00570 RPS8P6-201ENST00000426177 609 ntBASIC20.67■□□□□ 0.9
SOX1O00570 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC20.67■□□□□ 0.9
SOX1O00570 URGCP-206ENST00000446958 365 ntTSL 2 BASIC20.67■□□□□ 0.9
SOX1O00570 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC20.67■□□□□ 0.9
SOX1O00570 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.67■□□□□ 0.9
SOX1O00570 AC074051.2-201ENST00000565115 352 ntBASIC20.67■□□□□ 0.9
SOX1O00570 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC20.67■□□□□ 0.9
SOX1O00570 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC20.67■□□□□ 0.9
SOX1O00570 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC20.67■□□□□ 0.9
SOX1O00570 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC20.67■□□□□ 0.9
SOX1O00570 REXO1L6P-202ENST00000619970 1078 ntBASIC20.67■□□□□ 0.9
SOX1O00570 AC148477.8-201ENST00000624298 468 ntBASIC20.67■□□□□ 0.9
SOX1O00570 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SOX1O00570 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SOX1O00570 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SOX1O00570 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SOX1O00570 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.67■□□□□ 0.9
SOX1O00570 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SOX1O00570 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SOX1O00570 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SOX1O00570 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.66■□□□□ 0.9
SOX1O00570 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC20.66■□□□□ 0.9
SOX1O00570 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SOX1O00570 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC20.66■□□□□ 0.9
SOX1O00570 PIN1-206ENST00000587625 878 ntTSL 2 BASIC20.66■□□□□ 0.9
SOX1O00570 AC079602.3-201ENST00000623931 403 ntBASIC20.66■□□□□ 0.9
SOX1O00570 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC20.66■□□□□ 0.9
SOX1O00570 LINC00167-201ENST00000530583 1419 ntBASIC20.66■□□□□ 0.9
SOX1O00570 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.66■□□□□ 0.9
SOX1O00570 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SOX1O00570 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.66■□□□□ 0.9
SOX1O00570 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SOX1O00570 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SOX1O00570 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SOX1O00570 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SOX1O00570 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.65■□□□□ 0.9
SOX1O00570 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
SOX1O00570 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.65■□□□□ 0.9
SOX1O00570 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SOX1O00570 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.65■□□□□ 0.9
SOX1O00570 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SOX1O00570 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
SOX1O00570 HNRNPA1P28-201ENST00000424481 961 ntBASIC20.65■□□□□ 0.9
SOX1O00570 FAM197Y8-203ENST00000450145 560 ntBASIC20.65■□□□□ 0.9
SOX1O00570 RNF126P1-202ENST00000569893 925 ntBASIC20.65■□□□□ 0.9
SOX1O00570 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC20.65■□□□□ 0.9
SOX1O00570 AC099336.1-202ENST00000602961 463 ntBASIC20.65■□□□□ 0.9
SOX1O00570 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SOX1O00570 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SOX1O00570 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SOX1O00570 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.65■□□□□ 0.9
SOX1O00570 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.65■□□□□ 0.9
SOX1O00570 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SOX1O00570 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SOX1O00570 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SOX1O00570 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SOX1O00570 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SOX1O00570 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SOX1O00570 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SOX1O00570 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SOX1O00570 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SOX1O00570 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SOX1O00570 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SOX1O00570 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SOX1O00570 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SOX1O00570 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SOX1O00570 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.64■□□□□ 0.89
SOX1O00570 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC20.64■□□□□ 0.89
SOX1O00570 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC20.64■□□□□ 0.89
SOX1O00570 RPL13AP23-201ENST00000480739 586 ntBASIC20.64■□□□□ 0.89
SOX1O00570 PGAM5P1-201ENST00000518923 814 ntBASIC20.64■□□□□ 0.89
SOX1O00570 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC20.64■□□□□ 0.89
SOX1O00570 AL160286.2-201ENST00000567150 934 ntBASIC20.64■□□□□ 0.89
SOX1O00570 NAA38-203ENST00000575071 553 ntTSL 2 BASIC20.64■□□□□ 0.89
SOX1O00570 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC20.64■□□□□ 0.89
SOX1O00570 SPEG-225ENST00000617028 815 ntTSL 5 BASIC20.64■□□□□ 0.89
SOX1O00570 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.64■□□□□ 0.89
SOX1O00570 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SOX1O00570 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
SOX1O00570 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SOX1O00570 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SOX1O00570 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.63■□□□□ 0.89
SOX1O00570 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SOX1O00570 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SOX1O00570 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC20.63■□□□□ 0.89
SOX1O00570 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms