Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
O00370 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
O00370 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
O00370 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
O00370 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.67■□□□□ 0.9
O00370 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.67■□□□□ 0.9
O00370 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.67■□□□□ 0.9
O00370 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.67■□□□□ 0.9
O00370 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
O00370 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
O00370 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.67■□□□□ 0.9
O00370 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.67■□□□□ 0.9
O00370 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
O00370 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
O00370 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
O00370 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
O00370 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
O00370 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
O00370 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
O00370 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
O00370 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.67■□□□□ 0.9
O00370 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
O00370 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
O00370 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
O00370 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
O00370 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
O00370 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
O00370 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
O00370 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.66■□□□□ 0.9
O00370 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
O00370 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
O00370 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
O00370 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.66■□□□□ 0.9
O00370 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.66■□□□□ 0.9
O00370 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.66■□□□□ 0.9
O00370 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.66■□□□□ 0.9
O00370 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
O00370 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.66■□□□□ 0.9
O00370 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
O00370 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.66■□□□□ 0.9
O00370 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.66■□□□□ 0.9
O00370 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.66■□□□□ 0.9
O00370 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
O00370 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
O00370 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
O00370 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
O00370 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.66■□□□□ 0.9
O00370 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.66■□□□□ 0.9
O00370 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
O00370 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
O00370 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
O00370 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
O00370 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
O00370 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
O00370 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
O00370 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
O00370 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
O00370 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
O00370 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
O00370 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
O00370 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
O00370 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
O00370 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.65■□□□□ 0.9
O00370 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.65■□□□□ 0.9
O00370 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.65■□□□□ 0.9
O00370 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
O00370 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.65■□□□□ 0.9
O00370 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.65■□□□□ 0.9
O00370 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.65■□□□□ 0.9
O00370 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.65■□□□□ 0.9
O00370 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
O00370 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
O00370 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
O00370 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.65■□□□□ 0.9
O00370 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.65■□□□□ 0.9
O00370 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
O00370 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.65■□□□□ 0.9
O00370 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
O00370 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.64■□□□□ 0.9
O00370 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
O00370 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
O00370 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
O00370 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.9
O00370 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
O00370 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
O00370 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
O00370 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
O00370 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
O00370 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.64■□□□□ 0.89
O00370 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.64■□□□□ 0.89
O00370 AC005332.7-201ENST00000614046 2005 ntBASIC20.64■□□□□ 0.89
O00370 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.64■□□□□ 0.89
O00370 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
O00370 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.64■□□□□ 0.89
O00370 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
O00370 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
O00370 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
O00370 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
O00370 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
O00370 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms