Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.02■□□□□ 0.64
CDC7O00311 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDC7O00311 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDC7O00311 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CDC7O00311 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
CDC7O00311 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.02■□□□□ 0.64
CDC7O00311 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CDC7O00311 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.02■□□□□ 0.64
CDC7O00311 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.02■□□□□ 0.64
CDC7O00311 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.02■□□□□ 0.64
CDC7O00311 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.02■□□□□ 0.64
CDC7O00311 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.02■□□□□ 0.64
CDC7O00311 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.02■□□□□ 0.64
CDC7O00311 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.02■□□□□ 0.64
CDC7O00311 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
CDC7O00311 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CDC7O00311 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CDC7O00311 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.02■□□□□ 0.64
CDC7O00311 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CDC7O00311 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CDC7O00311 AC120498.9-201ENST00000339021 3867 ntBASIC19.02■□□□□ 0.64
CDC7O00311 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.02■□□□□ 0.64
CDC7O00311 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.63
CDC7O00311 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.02■□□□□ 0.63
CDC7O00311 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDC7O00311 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
CDC7O00311 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDC7O00311 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.01■□□□□ 0.63
CDC7O00311 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CDC7O00311 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDC7O00311 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDC7O00311 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.01■□□□□ 0.63
CDC7O00311 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDC7O00311 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDC7O00311 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDC7O00311 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDC7O00311 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDC7O00311 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDC7O00311 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.01■□□□□ 0.63
CDC7O00311 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDC7O00311 TUBB8P6-201ENST00000436895 1288 ntBASIC19.01■□□□□ 0.63
CDC7O00311 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.01■□□□□ 0.63
CDC7O00311 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.01■□□□□ 0.63
CDC7O00311 AP003097.1-201ENST00000530657 1135 ntBASIC19.01■□□□□ 0.63
CDC7O00311 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.01■□□□□ 0.63
CDC7O00311 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
CDC7O00311 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.01■□□□□ 0.63
CDC7O00311 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.01■□□□□ 0.63
CDC7O00311 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDC7O00311 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDC7O00311 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDC7O00311 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDC7O00311 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDC7O00311 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
CDC7O00311 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
CDC7O00311 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19■□□□□ 0.63
CDC7O00311 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDC7O00311 AC004408.2-201ENST00000623613 2777 ntBASIC19■□□□□ 0.63
CDC7O00311 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CDC7O00311 LINC01465-201ENST00000408887 1940 ntBASIC19■□□□□ 0.63
CDC7O00311 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CDC7O00311 AL020996.1-203ENST00000536896 2307 ntBASIC19■□□□□ 0.63
CDC7O00311 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CDC7O00311 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDC7O00311 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19■□□□□ 0.63
CDC7O00311 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDC7O00311 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDC7O00311 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDC7O00311 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDC7O00311 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19■□□□□ 0.63
CDC7O00311 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CDC7O00311 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CDC7O00311 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDC7O00311 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDC7O00311 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
CDC7O00311 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.99■□□□□ 0.63
CDC7O00311 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
CDC7O00311 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDC7O00311 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.99■□□□□ 0.63
CDC7O00311 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CDC7O00311 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.99■□□□□ 0.63
CDC7O00311 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.99■□□□□ 0.63
CDC7O00311 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.99■□□□□ 0.63
CDC7O00311 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CDC7O00311 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.99■□□□□ 0.63
CDC7O00311 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CDC7O00311 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.99■□□□□ 0.63
CDC7O00311 AC233263.1-201ENST00000578059 224 ntBASIC18.99■□□□□ 0.63
CDC7O00311 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDC7O00311 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDC7O00311 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CDC7O00311 AC141586.3-201ENST00000562166 1838 ntBASIC18.99■□□□□ 0.63
CDC7O00311 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDC7O00311 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CDC7O00311 AL049812.1-201ENST00000432563 2267 ntBASIC18.99■□□□□ 0.63
CDC7O00311 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.99■□□□□ 0.63
CDC7O00311 AL161938.1-201ENST00000569833 2180 ntBASIC18.99■□□□□ 0.63
CDC7O00311 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
CDC7O00311 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
CDC7O00311 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms