Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
NACAE9PAV3 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
NACAE9PAV3 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NACAE9PAV3 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC14.14□□□□□ -0.15
NACAE9PAV3 AC093484.2-201ENST00000580996 2166 ntBASIC14.14□□□□□ -0.15
NACAE9PAV3 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
NACAE9PAV3 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
NACAE9PAV3 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NACAE9PAV3 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC14.14□□□□□ -0.15
NACAE9PAV3 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NACAE9PAV3 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NACAE9PAV3 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
NACAE9PAV3 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC14.14□□□□□ -0.15
NACAE9PAV3 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NACAE9PAV3 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NACAE9PAV3 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC14.14□□□□□ -0.15
NACAE9PAV3 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
NACAE9PAV3 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC14.14□□□□□ -0.15
NACAE9PAV3 DET1-205ENST00000558413 583 ntTSL 4 BASIC14.14□□□□□ -0.15
NACAE9PAV3 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NACAE9PAV3 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
NACAE9PAV3 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
NACAE9PAV3 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NACAE9PAV3 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NACAE9PAV3 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NACAE9PAV3 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NACAE9PAV3 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NACAE9PAV3 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
NACAE9PAV3 STK25-204ENST00000405585 1643 ntTSL 2 BASIC14.14□□□□□ -0.15
NACAE9PAV3 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NACAE9PAV3 AC090340.1-201ENST00000620778 4980 ntBASIC14.13□□□□□ -0.15
NACAE9PAV3 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
NACAE9PAV3 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NACAE9PAV3 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NACAE9PAV3 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC14.13□□□□□ -0.15
NACAE9PAV3 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
NACAE9PAV3 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC14.13□□□□□ -0.15
NACAE9PAV3 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NACAE9PAV3 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
NACAE9PAV3 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NACAE9PAV3 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NACAE9PAV3 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NACAE9PAV3 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NACAE9PAV3 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NACAE9PAV3 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NACAE9PAV3 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NACAE9PAV3 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC14.13□□□□□ -0.15
NACAE9PAV3 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
NACAE9PAV3 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
NACAE9PAV3 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
NACAE9PAV3 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NACAE9PAV3 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NACAE9PAV3 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC14.13□□□□□ -0.15
NACAE9PAV3 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NACAE9PAV3 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
NACAE9PAV3 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NACAE9PAV3 GCSHP5-201ENST00000443090 522 ntBASIC14.13□□□□□ -0.15
NACAE9PAV3 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
NACAE9PAV3 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NACAE9PAV3 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
NACAE9PAV3 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NACAE9PAV3 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
NACAE9PAV3 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
NACAE9PAV3 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
NACAE9PAV3 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NACAE9PAV3 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC14.12□□□□□ -0.15
NACAE9PAV3 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC14.12□□□□□ -0.15
NACAE9PAV3 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC14.12□□□□□ -0.15
NACAE9PAV3 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NACAE9PAV3 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC14.12□□□□□ -0.15
NACAE9PAV3 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NACAE9PAV3 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC14.12□□□□□ -0.15
NACAE9PAV3 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
NACAE9PAV3 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NACAE9PAV3 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NACAE9PAV3 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
NACAE9PAV3 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC14.12□□□□□ -0.15
NACAE9PAV3 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC14.12□□□□□ -0.15
NACAE9PAV3 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC14.12□□□□□ -0.15
NACAE9PAV3 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
NACAE9PAV3 AC026366.1-201ENST00000488803 879 ntBASIC14.12□□□□□ -0.15
NACAE9PAV3 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
NACAE9PAV3 PNMA6B-201ENST00000538162 1200 ntBASIC14.12□□□□□ -0.15
NACAE9PAV3 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
NACAE9PAV3 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NACAE9PAV3 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NACAE9PAV3 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NACAE9PAV3 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NACAE9PAV3 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NACAE9PAV3 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
NACAE9PAV3 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
NACAE9PAV3 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NACAE9PAV3 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NACAE9PAV3 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NACAE9PAV3 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC14.12□□□□□ -0.15
NACAE9PAV3 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NACAE9PAV3 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NACAE9PAV3 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
NACAE9PAV3 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NACAE9PAV3 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms