Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.88■□□□□ 0.45
CPSF4LA6NMK7 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CPSF4LA6NMK7 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPSF4LA6NMK7 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPSF4LA6NMK7 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.88■□□□□ 0.45
CPSF4LA6NMK7 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.88■□□□□ 0.45
CPSF4LA6NMK7 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
CPSF4LA6NMK7 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.88■□□□□ 0.45
CPSF4LA6NMK7 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.88■□□□□ 0.45
CPSF4LA6NMK7 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC17.88■□□□□ 0.45
CPSF4LA6NMK7 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.88■□□□□ 0.45
CPSF4LA6NMK7 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPSF4LA6NMK7 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.88■□□□□ 0.45
CPSF4LA6NMK7 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.88■□□□□ 0.45
CPSF4LA6NMK7 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.88■□□□□ 0.45
CPSF4LA6NMK7 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPSF4LA6NMK7 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPSF4LA6NMK7 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPSF4LA6NMK7 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
CPSF4LA6NMK7 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.88■□□□□ 0.45
CPSF4LA6NMK7 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPSF4LA6NMK7 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.88■□□□□ 0.45
CPSF4LA6NMK7 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CPSF4LA6NMK7 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.88■□□□□ 0.45
CPSF4LA6NMK7 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CPSF4LA6NMK7 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CPSF4LA6NMK7 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CPSF4LA6NMK7 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CPSF4LA6NMK7 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPSF4LA6NMK7 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPSF4LA6NMK7 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPSF4LA6NMK7 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPSF4LA6NMK7 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPSF4LA6NMK7 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CPSF4LA6NMK7 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
CPSF4LA6NMK7 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CPSF4LA6NMK7 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPSF4LA6NMK7 GUSBP6-202ENST00000438529 1198 ntBASIC17.87■□□□□ 0.45
CPSF4LA6NMK7 RPS2P52-201ENST00000469610 820 ntBASIC17.87■□□□□ 0.45
CPSF4LA6NMK7 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.87■□□□□ 0.45
CPSF4LA6NMK7 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CPSF4LA6NMK7 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
CPSF4LA6NMK7 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.87■□□□□ 0.45
CPSF4LA6NMK7 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPSF4LA6NMK7 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CPSF4LA6NMK7 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPSF4LA6NMK7 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPSF4LA6NMK7 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.87■□□□□ 0.45
CPSF4LA6NMK7 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.87■□□□□ 0.45
CPSF4LA6NMK7 AC093503.3-201ENST00000624917 2352 ntBASIC17.87■□□□□ 0.45
CPSF4LA6NMK7 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CPSF4LA6NMK7 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPSF4LA6NMK7 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPSF4LA6NMK7 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPSF4LA6NMK7 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CPSF4LA6NMK7 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CPSF4LA6NMK7 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CPSF4LA6NMK7 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPSF4LA6NMK7 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
CPSF4LA6NMK7 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CPSF4LA6NMK7 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPSF4LA6NMK7 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CPSF4LA6NMK7 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.86■□□□□ 0.45
CPSF4LA6NMK7 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CPSF4LA6NMK7 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.86■□□□□ 0.45
CPSF4LA6NMK7 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CPSF4LA6NMK7 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.86■□□□□ 0.45
CPSF4LA6NMK7 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPSF4LA6NMK7 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CPSF4LA6NMK7 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPSF4LA6NMK7 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPSF4LA6NMK7 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CPSF4LA6NMK7 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CPSF4LA6NMK7 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPSF4LA6NMK7 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPSF4LA6NMK7 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPSF4LA6NMK7 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPSF4LA6NMK7 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPSF4LA6NMK7 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPSF4LA6NMK7 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CPSF4LA6NMK7 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CPSF4LA6NMK7 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.85■□□□□ 0.45
CPSF4LA6NMK7 TSPY6P-201ENST00000448518 926 ntBASIC17.85■□□□□ 0.45
CPSF4LA6NMK7 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.85■□□□□ 0.45
CPSF4LA6NMK7 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.85■□□□□ 0.45
CPSF4LA6NMK7 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CPSF4LA6NMK7 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CPSF4LA6NMK7 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
CPSF4LA6NMK7 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPSF4LA6NMK7 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
CPSF4LA6NMK7 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPSF4LA6NMK7 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CPSF4LA6NMK7 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CPSF4LA6NMK7 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CPSF4LA6NMK7 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.84■□□□□ 0.45
CPSF4LA6NMK7 AC092368.3-202ENST00000574180 1591 ntBASIC17.84■□□□□ 0.45
CPSF4LA6NMK7 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.84■□□□□ 0.45
CPSF4LA6NMK7 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CPSF4LA6NMK7 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CPSF4LA6NMK7 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms