Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC01546A6NGU7 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LINC01546A6NGU7 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC01546A6NGU7 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC13.7□□□□□ -0.22
LINC01546A6NGU7 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LINC01546A6NGU7 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC13.7□□□□□ -0.22
LINC01546A6NGU7 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC01546A6NGU7 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC01546A6NGU7 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
LINC01546A6NGU7 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC13.7□□□□□ -0.22
LINC01546A6NGU7 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC13.7□□□□□ -0.22
LINC01546A6NGU7 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC13.7□□□□□ -0.22
LINC01546A6NGU7 RARRES2P1-201ENST00000474487 481 ntBASIC13.7□□□□□ -0.22
LINC01546A6NGU7 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC13.7□□□□□ -0.22
LINC01546A6NGU7 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC13.7□□□□□ -0.22
LINC01546A6NGU7 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
LINC01546A6NGU7 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC13.7□□□□□ -0.22
LINC01546A6NGU7 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC01546A6NGU7 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC13.7□□□□□ -0.22
LINC01546A6NGU7 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
LINC01546A6NGU7 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LINC01546A6NGU7 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
LINC01546A6NGU7 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC01546A6NGU7 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC01546A6NGU7 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
LINC01546A6NGU7 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LINC01546A6NGU7 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LINC01546A6NGU7 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01546A6NGU7 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01546A6NGU7 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01546A6NGU7 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01546A6NGU7 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01546A6NGU7 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC13.69□□□□□ -0.22
LINC01546A6NGU7 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
LINC01546A6NGU7 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC13.69□□□□□ -0.22
LINC01546A6NGU7 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01546A6NGU7 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01546A6NGU7 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC13.69□□□□□ -0.22
LINC01546A6NGU7 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01546A6NGU7 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01546A6NGU7 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC13.69□□□□□ -0.22
LINC01546A6NGU7 IRS3P-201ENST00000223076 1006 ntBASIC13.69□□□□□ -0.22
LINC01546A6NGU7 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01546A6NGU7 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01546A6NGU7 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC13.69□□□□□ -0.22
LINC01546A6NGU7 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01546A6NGU7 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01546A6NGU7 AC027682.1-201ENST00000562846 899 ntBASIC13.69□□□□□ -0.22
LINC01546A6NGU7 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC13.69□□□□□ -0.22
LINC01546A6NGU7 AC008764.7-201ENST00000593779 1081 ntBASIC13.69□□□□□ -0.22
LINC01546A6NGU7 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01546A6NGU7 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC13.69□□□□□ -0.22
LINC01546A6NGU7 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC13.69□□□□□ -0.22
LINC01546A6NGU7 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
LINC01546A6NGU7 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01546A6NGU7 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC13.69□□□□□ -0.22
LINC01546A6NGU7 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01546A6NGU7 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01546A6NGU7 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01546A6NGU7 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC13.69□□□□□ -0.22
LINC01546A6NGU7 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01546A6NGU7 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01546A6NGU7 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01546A6NGU7 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC13.69□□□□□ -0.22
LINC01546A6NGU7 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01546A6NGU7 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01546A6NGU7 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01546A6NGU7 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01546A6NGU7 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01546A6NGU7 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC13.68□□□□□ -0.22
LINC01546A6NGU7 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01546A6NGU7 FEM1AP3-201ENST00000403722 1741 ntBASIC13.68□□□□□ -0.22
LINC01546A6NGU7 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
LINC01546A6NGU7 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01546A6NGU7 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
LINC01546A6NGU7 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01546A6NGU7 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01546A6NGU7 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC13.68□□□□□ -0.22
LINC01546A6NGU7 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01546A6NGU7 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC13.68□□□□□ -0.22
LINC01546A6NGU7 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC13.68□□□□□ -0.22
LINC01546A6NGU7 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01546A6NGU7 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC13.68□□□□□ -0.22
LINC01546A6NGU7 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC13.68□□□□□ -0.22
LINC01546A6NGU7 AL354811.1-201ENST00000610286 706 ntBASIC13.68□□□□□ -0.22
LINC01546A6NGU7 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC13.68□□□□□ -0.22
LINC01546A6NGU7 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC13.68□□□□□ -0.22
LINC01546A6NGU7 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01546A6NGU7 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
LINC01546A6NGU7 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01546A6NGU7 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
LINC01546A6NGU7 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01546A6NGU7 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
LINC01546A6NGU7 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01546A6NGU7 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01546A6NGU7 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01546A6NGU7 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01546A6NGU7 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
LINC01546A6NGU7 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC13.68□□□□□ -0.22
LINC01546A6NGU7 COBL-210ENST00000632460 1941 ntTSL 5 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms