Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV27A0A0K0K1C4 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV27A0A0K0K1C4 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC13.71□□□□□ -0.21
TRBV27A0A0K0K1C4 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC13.71□□□□□ -0.21
TRBV27A0A0K0K1C4 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC13.71□□□□□ -0.21
TRBV27A0A0K0K1C4 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC13.71□□□□□ -0.21
TRBV27A0A0K0K1C4 KRT18P61-201ENST00000585825 1298 ntBASIC13.71□□□□□ -0.21
TRBV27A0A0K0K1C4 CYP2T3P-201ENST00000601990 817 ntBASIC13.71□□□□□ -0.21
TRBV27A0A0K0K1C4 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
TRBV27A0A0K0K1C4 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV27A0A0K0K1C4 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV27A0A0K0K1C4 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV27A0A0K0K1C4 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV27A0A0K0K1C4 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV27A0A0K0K1C4 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV27A0A0K0K1C4 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
TRBV27A0A0K0K1C4 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRBV27A0A0K0K1C4 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC13.71□□□□□ -0.21
TRBV27A0A0K0K1C4 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
TRBV27A0A0K0K1C4 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRBV27A0A0K0K1C4 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC13.71□□□□□ -0.22
TRBV27A0A0K0K1C4 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC13.71□□□□□ -0.22
TRBV27A0A0K0K1C4 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRBV27A0A0K0K1C4 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
TRBV27A0A0K0K1C4 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRBV27A0A0K0K1C4 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC13.71□□□□□ -0.22
TRBV27A0A0K0K1C4 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRBV27A0A0K0K1C4 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV27A0A0K0K1C4 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV27A0A0K0K1C4 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
TRBV27A0A0K0K1C4 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV27A0A0K0K1C4 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
TRBV27A0A0K0K1C4 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV27A0A0K0K1C4 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV27A0A0K0K1C4 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV27A0A0K0K1C4 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV27A0A0K0K1C4 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV27A0A0K0K1C4 KRT18P11-201ENST00000435214 1283 ntBASIC13.7□□□□□ -0.22
TRBV27A0A0K0K1C4 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC13.7□□□□□ -0.22
TRBV27A0A0K0K1C4 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC13.7□□□□□ -0.22
TRBV27A0A0K0K1C4 C2orf69P4-201ENST00000565394 541 ntBASIC13.7□□□□□ -0.22
TRBV27A0A0K0K1C4 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
TRBV27A0A0K0K1C4 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
TRBV27A0A0K0K1C4 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV27A0A0K0K1C4 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV27A0A0K0K1C4 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC13.7□□□□□ -0.22
TRBV27A0A0K0K1C4 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV27A0A0K0K1C4 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV27A0A0K0K1C4 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC13.7□□□□□ -0.22
TRBV27A0A0K0K1C4 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV27A0A0K0K1C4 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV27A0A0K0K1C4 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV27A0A0K0K1C4 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV27A0A0K0K1C4 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV27A0A0K0K1C4 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV27A0A0K0K1C4 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV27A0A0K0K1C4 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV27A0A0K0K1C4 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV27A0A0K0K1C4 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRBV27A0A0K0K1C4 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC13.7□□□□□ -0.22
TRBV27A0A0K0K1C4 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV27A0A0K0K1C4 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV27A0A0K0K1C4 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV27A0A0K0K1C4 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
TRBV27A0A0K0K1C4 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC13.69□□□□□ -0.22
TRBV27A0A0K0K1C4 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV27A0A0K0K1C4 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TRBV27A0A0K0K1C4 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV27A0A0K0K1C4 EFTUD1P1-204ENST00000560401 1798 ntBASIC13.69□□□□□ -0.22
TRBV27A0A0K0K1C4 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV27A0A0K0K1C4 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV27A0A0K0K1C4 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV27A0A0K0K1C4 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV27A0A0K0K1C4 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV27A0A0K0K1C4 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
TRBV27A0A0K0K1C4 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC13.69□□□□□ -0.22
TRBV27A0A0K0K1C4 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV27A0A0K0K1C4 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC13.69□□□□□ -0.22
TRBV27A0A0K0K1C4 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TRBV27A0A0K0K1C4 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV27A0A0K0K1C4 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
TRBV27A0A0K0K1C4 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV27A0A0K0K1C4 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TRBV27A0A0K0K1C4 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TRBV27A0A0K0K1C4 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV27A0A0K0K1C4 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC13.69□□□□□ -0.22
TRBV27A0A0K0K1C4 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC13.69□□□□□ -0.22
TRBV27A0A0K0K1C4 FP475955.4-201ENST00000623131 1990 ntBASIC13.69□□□□□ -0.22
TRBV27A0A0K0K1C4 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV27A0A0K0K1C4 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC13.69□□□□□ -0.22
TRBV27A0A0K0K1C4 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRBV27A0A0K0K1C4 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
TRBV27A0A0K0K1C4 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
TRBV27A0A0K0K1C4 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV27A0A0K0K1C4 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV27A0A0K0K1C4 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC13.68□□□□□ -0.22
TRBV27A0A0K0K1C4 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TRBV27A0A0K0K1C4 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC13.68□□□□□ -0.22
TRBV27A0A0K0K1C4 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC13.68□□□□□ -0.22
TRBV27A0A0K0K1C4 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms