Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV34A0A0B4J273 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
TRAV34A0A0B4J273 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV34A0A0B4J273 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV34A0A0B4J273 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TRAV34A0A0B4J273 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV34A0A0B4J273 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV34A0A0B4J273 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV34A0A0B4J273 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV34A0A0B4J273 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
TRAV34A0A0B4J273 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV34A0A0B4J273 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC14.98□□□□□ -0.01
TRAV34A0A0B4J273 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
TRAV34A0A0B4J273 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV34A0A0B4J273 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV34A0A0B4J273 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV34A0A0B4J273 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV34A0A0B4J273 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV34A0A0B4J273 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAV34A0A0B4J273 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV34A0A0B4J273 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC14.98□□□□□ -0.01
TRAV34A0A0B4J273 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAV34A0A0B4J273 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC14.98□□□□□ -0.01
TRAV34A0A0B4J273 CCDC92B-201ENST00000575506 885 ntBASIC14.98□□□□□ -0.01
TRAV34A0A0B4J273 AC243732.1-201ENST00000612648 864 ntBASIC14.98□□□□□ -0.01
TRAV34A0A0B4J273 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC14.98□□□□□ -0.01
TRAV34A0A0B4J273 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV34A0A0B4J273 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV34A0A0B4J273 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV34A0A0B4J273 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAV34A0A0B4J273 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV34A0A0B4J273 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC14.98□□□□□ -0.01
TRAV34A0A0B4J273 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
TRAV34A0A0B4J273 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
TRAV34A0A0B4J273 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV34A0A0B4J273 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC14.98□□□□□ -0.01
TRAV34A0A0B4J273 CROCCP3-202ENST00000420820 1947 ntBASIC14.98□□□□□ -0.01
TRAV34A0A0B4J273 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV34A0A0B4J273 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV34A0A0B4J273 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV34A0A0B4J273 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV34A0A0B4J273 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV34A0A0B4J273 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV34A0A0B4J273 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
TRAV34A0A0B4J273 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV34A0A0B4J273 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAV34A0A0B4J273 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV34A0A0B4J273 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
TRAV34A0A0B4J273 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV34A0A0B4J273 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV34A0A0B4J273 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV34A0A0B4J273 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV34A0A0B4J273 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV34A0A0B4J273 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV34A0A0B4J273 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV34A0A0B4J273 NME4-202ENST00000382940 766 ntTSL 3 BASIC14.97□□□□□ -0.01
TRAV34A0A0B4J273 SAPCD2P1-201ENST00000395413 1184 ntBASIC14.97□□□□□ -0.01
TRAV34A0A0B4J273 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
TRAV34A0A0B4J273 CDV3P1-201ENST00000471403 739 ntBASIC14.97□□□□□ -0.01
TRAV34A0A0B4J273 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC14.97□□□□□ -0.01
TRAV34A0A0B4J273 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAV34A0A0B4J273 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV34A0A0B4J273 NME4-211ENST00000620944 1193 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAV34A0A0B4J273 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV34A0A0B4J273 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV34A0A0B4J273 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV34A0A0B4J273 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC14.97□□□□□ -0.01
TRAV34A0A0B4J273 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV34A0A0B4J273 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV34A0A0B4J273 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
TRAV34A0A0B4J273 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV34A0A0B4J273 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
TRAV34A0A0B4J273 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV34A0A0B4J273 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV34A0A0B4J273 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV34A0A0B4J273 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
TRAV34A0A0B4J273 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV34A0A0B4J273 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV34A0A0B4J273 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV34A0A0B4J273 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV34A0A0B4J273 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV34A0A0B4J273 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV34A0A0B4J273 PCDHB18P-201ENST00000524813 2368 ntBASIC14.96□□□□□ -0.01
TRAV34A0A0B4J273 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC14.96□□□□□ -0.01
TRAV34A0A0B4J273 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV34A0A0B4J273 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV34A0A0B4J273 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC14.96□□□□□ -0.01
TRAV34A0A0B4J273 PGM5P4-201ENST00000421970 445 ntBASIC14.96□□□□□ -0.01
TRAV34A0A0B4J273 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC14.96□□□□□ -0.01
TRAV34A0A0B4J273 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV34A0A0B4J273 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC14.96□□□□□ -0.01
TRAV34A0A0B4J273 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV34A0A0B4J273 AL136967.2-201ENST00000623968 743 ntBASIC14.96□□□□□ -0.01
TRAV34A0A0B4J273 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV34A0A0B4J273 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV34A0A0B4J273 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV34A0A0B4J273 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
TRAV34A0A0B4J273 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
TRAV34A0A0B4J273 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
TRAV34A0A0B4J273 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms