Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV8-1A0A0A6YYK1 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV8-1A0A0A6YYK1 TEX21P-204ENST00000641479 1693 ntBASIC14.74□□□□□ -0.05
TRAV8-1A0A0A6YYK1 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV8-1A0A0A6YYK1 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV8-1A0A0A6YYK1 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV8-1A0A0A6YYK1 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV8-1A0A0A6YYK1 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV8-1A0A0A6YYK1 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV8-1A0A0A6YYK1 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV8-1A0A0A6YYK1 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV8-1A0A0A6YYK1 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV8-1A0A0A6YYK1 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV8-1A0A0A6YYK1 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC14.73□□□□□ -0.05
TRAV8-1A0A0A6YYK1 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV8-1A0A0A6YYK1 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV8-1A0A0A6YYK1 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAV8-1A0A0A6YYK1 HTR7P1-202ENST00000624664 4411 ntBASIC14.73□□□□□ -0.05
TRAV8-1A0A0A6YYK1 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV8-1A0A0A6YYK1 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV8-1A0A0A6YYK1 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV8-1A0A0A6YYK1 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC14.73□□□□□ -0.05
TRAV8-1A0A0A6YYK1 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV8-1A0A0A6YYK1 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
TRAV8-1A0A0A6YYK1 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV8-1A0A0A6YYK1 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV8-1A0A0A6YYK1 AC007322.4-201ENST00000509611 723 ntBASIC14.73□□□□□ -0.05
TRAV8-1A0A0A6YYK1 RARRES2P4-201ENST00000514074 484 ntBASIC14.73□□□□□ -0.05
TRAV8-1A0A0A6YYK1 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV8-1A0A0A6YYK1 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV8-1A0A0A6YYK1 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
TRAV8-1A0A0A6YYK1 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV8-1A0A0A6YYK1 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
TRAV8-1A0A0A6YYK1 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
TRAV8-1A0A0A6YYK1 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV8-1A0A0A6YYK1 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV8-1A0A0A6YYK1 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
TRAV8-1A0A0A6YYK1 GCK-205ENST00000437084 1385 ntTSL 5 BASIC14.73□□□□□ -0.05
TRAV8-1A0A0A6YYK1 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV8-1A0A0A6YYK1 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV8-1A0A0A6YYK1 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV8-1A0A0A6YYK1 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV8-1A0A0A6YYK1 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC14.72□□□□□ -0.05
TRAV8-1A0A0A6YYK1 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV8-1A0A0A6YYK1 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV8-1A0A0A6YYK1 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV8-1A0A0A6YYK1 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV8-1A0A0A6YYK1 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV8-1A0A0A6YYK1 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC14.72□□□□□ -0.05
TRAV8-1A0A0A6YYK1 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV8-1A0A0A6YYK1 KRT18P68-201ENST00000392293 1000 ntBASIC14.72□□□□□ -0.05
TRAV8-1A0A0A6YYK1 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV8-1A0A0A6YYK1 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV8-1A0A0A6YYK1 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC14.72□□□□□ -0.05
TRAV8-1A0A0A6YYK1 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV8-1A0A0A6YYK1 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV8-1A0A0A6YYK1 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
TRAV8-1A0A0A6YYK1 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV8-1A0A0A6YYK1 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
TRAV8-1A0A0A6YYK1 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC14.72□□□□□ -0.05
TRAV8-1A0A0A6YYK1 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV8-1A0A0A6YYK1 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV8-1A0A0A6YYK1 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC14.72□□□□□ -0.05
TRAV8-1A0A0A6YYK1 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC14.72□□□□□ -0.05
TRAV8-1A0A0A6YYK1 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV8-1A0A0A6YYK1 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV8-1A0A0A6YYK1 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC14.72□□□□□ -0.05
TRAV8-1A0A0A6YYK1 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
TRAV8-1A0A0A6YYK1 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV8-1A0A0A6YYK1 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
TRAV8-1A0A0A6YYK1 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV8-1A0A0A6YYK1 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC14.71□□□□□ -0.05
TRAV8-1A0A0A6YYK1 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV8-1A0A0A6YYK1 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV8-1A0A0A6YYK1 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
TRAV8-1A0A0A6YYK1 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC14.71□□□□□ -0.05
TRAV8-1A0A0A6YYK1 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV8-1A0A0A6YYK1 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV8-1A0A0A6YYK1 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV8-1A0A0A6YYK1 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC14.71□□□□□ -0.05
TRAV8-1A0A0A6YYK1 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
TRAV8-1A0A0A6YYK1 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV8-1A0A0A6YYK1 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV8-1A0A0A6YYK1 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC14.71□□□□□ -0.05
TRAV8-1A0A0A6YYK1 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC14.71□□□□□ -0.05
TRAV8-1A0A0A6YYK1 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC14.71□□□□□ -0.05
TRAV8-1A0A0A6YYK1 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC14.71□□□□□ -0.05
TRAV8-1A0A0A6YYK1 AC100791.3-201ENST00000617619 330 ntBASIC14.71□□□□□ -0.05
TRAV8-1A0A0A6YYK1 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
TRAV8-1A0A0A6YYK1 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV8-1A0A0A6YYK1 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC14.71□□□□□ -0.05
TRAV8-1A0A0A6YYK1 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV8-1A0A0A6YYK1 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV8-1A0A0A6YYK1 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV8-1A0A0A6YYK1 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
TRAV8-1A0A0A6YYK1 AC141586.3-201ENST00000562166 1838 ntBASIC14.71□□□□□ -0.06
TRAV8-1A0A0A6YYK1 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRAV8-1A0A0A6YYK1 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRAV8-1A0A0A6YYK1 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TRAV8-1A0A0A6YYK1 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms