Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.66■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.66■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 SNORA78-201ENST00000459373 127 ntBASIC17.66■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.66■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.66■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.66■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.65■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.65■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.65■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.65■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.65■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.65■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.65■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.65■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.65■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.65■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 AL135905.2-201ENST00000584934 1404 ntBASIC17.64■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
TNFSF12-TNFSF13A0A0A6YY99 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TNFSF12-TNFSF13A0A0A6YY99 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TNFSF12-TNFSF13A0A0A6YY99 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.64■□□□□ 0.41
TNFSF12-TNFSF13A0A0A6YY99 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TNFSF12-TNFSF13A0A0A6YY99 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TNFSF12-TNFSF13A0A0A6YY99 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TNFSF12-TNFSF13A0A0A6YY99 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.64■□□□□ 0.41
TNFSF12-TNFSF13A0A0A6YY99 RARRES2P10-201ENST00000564312 460 ntBASIC17.64■□□□□ 0.41
TNFSF12-TNFSF13A0A0A6YY99 C1QL1P1-201ENST00000568105 661 ntBASIC17.64■□□□□ 0.41
TNFSF12-TNFSF13A0A0A6YY99 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.64■□□□□ 0.41
TNFSF12-TNFSF13A0A0A6YY99 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.64■□□□□ 0.41
TNFSF12-TNFSF13A0A0A6YY99 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
TNFSF12-TNFSF13A0A0A6YY99 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TNFSF12-TNFSF13A0A0A6YY99 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TNFSF12-TNFSF13A0A0A6YY99 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.64■□□□□ 0.41
TNFSF12-TNFSF13A0A0A6YY99 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.64■□□□□ 0.41
TNFSF12-TNFSF13A0A0A6YY99 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TNFSF12-TNFSF13A0A0A6YY99 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TNFSF12-TNFSF13A0A0A6YY99 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TNFSF12-TNFSF13A0A0A6YY99 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.64■□□□□ 0.41
TNFSF12-TNFSF13A0A0A6YY99 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TNFSF12-TNFSF13A0A0A6YY99 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TNFSF12-TNFSF13A0A0A6YY99 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.63■□□□□ 0.41
TNFSF12-TNFSF13A0A0A6YY99 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TNFSF12-TNFSF13A0A0A6YY99 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
TNFSF12-TNFSF13A0A0A6YY99 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TNFSF12-TNFSF13A0A0A6YY99 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.63■□□□□ 0.41
TNFSF12-TNFSF13A0A0A6YY99 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TNFSF12-TNFSF13A0A0A6YY99 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.63■□□□□ 0.41
TNFSF12-TNFSF13A0A0A6YY99 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.63■□□□□ 0.41
TNFSF12-TNFSF13A0A0A6YY99 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.63■□□□□ 0.41
TNFSF12-TNFSF13A0A0A6YY99 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
TNFSF12-TNFSF13A0A0A6YY99 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.63■□□□□ 0.41
TNFSF12-TNFSF13A0A0A6YY99 AL049637.2-201ENST00000641778 930 ntBASIC17.63■□□□□ 0.41
TNFSF12-TNFSF13A0A0A6YY99 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TNFSF12-TNFSF13A0A0A6YY99 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.63■□□□□ 0.41
TNFSF12-TNFSF13A0A0A6YY99 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TNFSF12-TNFSF13A0A0A6YY99 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TNFSF12-TNFSF13A0A0A6YY99 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TNFSF12-TNFSF13A0A0A6YY99 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.63■□□□□ 0.41
TNFSF12-TNFSF13A0A0A6YY99 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TNFSF12-TNFSF13A0A0A6YY99 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TNFSF12-TNFSF13A0A0A6YY99 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TNFSF12-TNFSF13A0A0A6YY99 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
TNFSF12-TNFSF13A0A0A6YY99 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.62■□□□□ 0.41
TNFSF12-TNFSF13A0A0A6YY99 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TNFSF12-TNFSF13A0A0A6YY99 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TNFSF12-TNFSF13A0A0A6YY99 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TNFSF12-TNFSF13A0A0A6YY99 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TNFSF12-TNFSF13A0A0A6YY99 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms