Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
TRAV9-1A0A075B6T8 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV9-1A0A075B6T8 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TRAV9-1A0A075B6T8 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV9-1A0A075B6T8 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
TRAV9-1A0A075B6T8 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAV9-1A0A075B6T8 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV9-1A0A075B6T8 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV9-1A0A075B6T8 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV9-1A0A075B6T8 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TRAV9-1A0A075B6T8 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC14.56□□□□□ -0.08
TRAV9-1A0A075B6T8 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TRAV9-1A0A075B6T8 AL138724.1-201ENST00000606771 1088 ntBASIC14.56□□□□□ -0.08
TRAV9-1A0A075B6T8 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC14.56□□□□□ -0.08
TRAV9-1A0A075B6T8 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC14.56□□□□□ -0.08
TRAV9-1A0A075B6T8 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV9-1A0A075B6T8 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC14.56□□□□□ -0.08
TRAV9-1A0A075B6T8 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV9-1A0A075B6T8 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV9-1A0A075B6T8 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
TRAV9-1A0A075B6T8 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV9-1A0A075B6T8 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
TRAV9-1A0A075B6T8 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV9-1A0A075B6T8 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV9-1A0A075B6T8 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
TRAV9-1A0A075B6T8 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC14.56□□□□□ -0.08
TRAV9-1A0A075B6T8 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV9-1A0A075B6T8 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV9-1A0A075B6T8 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV9-1A0A075B6T8 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV9-1A0A075B6T8 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC14.55□□□□□ -0.08
TRAV9-1A0A075B6T8 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV9-1A0A075B6T8 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV9-1A0A075B6T8 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC14.55□□□□□ -0.08
TRAV9-1A0A075B6T8 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV9-1A0A075B6T8 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
TRAV9-1A0A075B6T8 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC14.55□□□□□ -0.08
TRAV9-1A0A075B6T8 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV9-1A0A075B6T8 HES6-206ENST00000409574 738 ntTSL 2 BASIC14.55□□□□□ -0.08
TRAV9-1A0A075B6T8 SLC25A6P5-201ENST00000435663 894 ntBASIC14.55□□□□□ -0.08
TRAV9-1A0A075B6T8 SLC47A1P1-202ENST00000449666 945 ntBASIC14.55□□□□□ -0.08
TRAV9-1A0A075B6T8 BRD4-212ENST00000630599 726 ntTSL 2 BASIC14.55□□□□□ -0.08
TRAV9-1A0A075B6T8 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV9-1A0A075B6T8 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV9-1A0A075B6T8 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV9-1A0A075B6T8 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV9-1A0A075B6T8 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV9-1A0A075B6T8 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV9-1A0A075B6T8 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
TRAV9-1A0A075B6T8 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
TRAV9-1A0A075B6T8 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
TRAV9-1A0A075B6T8 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV9-1A0A075B6T8 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV9-1A0A075B6T8 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
TRAV9-1A0A075B6T8 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV9-1A0A075B6T8 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV9-1A0A075B6T8 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
TRAV9-1A0A075B6T8 AC099398.1-201ENST00000567919 2776 ntBASIC14.55□□□□□ -0.08
TRAV9-1A0A075B6T8 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV9-1A0A075B6T8 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV9-1A0A075B6T8 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC14.55□□□□□ -0.08
TRAV9-1A0A075B6T8 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV9-1A0A075B6T8 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV9-1A0A075B6T8 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TRAV9-1A0A075B6T8 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV9-1A0A075B6T8 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV9-1A0A075B6T8 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV9-1A0A075B6T8 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV9-1A0A075B6T8 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC14.54□□□□□ -0.08
TRAV9-1A0A075B6T8 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAV9-1A0A075B6T8 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV9-1A0A075B6T8 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV9-1A0A075B6T8 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV9-1A0A075B6T8 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV9-1A0A075B6T8 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAV9-1A0A075B6T8 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAV9-1A0A075B6T8 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAV9-1A0A075B6T8 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV9-1A0A075B6T8 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV9-1A0A075B6T8 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV9-1A0A075B6T8 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV9-1A0A075B6T8 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC14.54□□□□□ -0.08
TRAV9-1A0A075B6T8 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV9-1A0A075B6T8 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAV9-1A0A075B6T8 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV9-1A0A075B6T8 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
TRAV9-1A0A075B6T8 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC14.54□□□□□ -0.08
TRAV9-1A0A075B6T8 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV9-1A0A075B6T8 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV9-1A0A075B6T8 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV9-1A0A075B6T8 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC14.54□□□□□ -0.08
TRAV9-1A0A075B6T8 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV9-1A0A075B6T8 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
TRAV9-1A0A075B6T8 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV9-1A0A075B6T8 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV9-1A0A075B6T8 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
TRAV9-1A0A075B6T8 CD276-203ENST00000537340 2439 ntTSL 2 BASIC14.54□□□□□ -0.08
TRAV9-1A0A075B6T8 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV9-1A0A075B6T8 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
TRAV9-1A0A075B6T8 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms