Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.69□□□□□ -1.34
PCDHB11Q9Y5F2 COX6CP5-201ENST00000527162 228 ntBASIC6.69□□□□□ -1.34
PCDHB11Q9Y5F2 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC6.69□□□□□ -1.34
PCDHB11Q9Y5F2 AC063950.1-201ENST00000552036 308 ntBASIC6.69□□□□□ -1.34
PCDHB11Q9Y5F2 SNRPGP18-201ENST00000553000 214 ntBASIC6.69□□□□□ -1.34
PCDHB11Q9Y5F2 DPPA3P2-201ENST00000553589 478 ntBASIC6.69□□□□□ -1.34
PCDHB11Q9Y5F2 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC6.69□□□□□ -1.34
PCDHB11Q9Y5F2 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC6.69□□□□□ -1.34
PCDHB11Q9Y5F2 NCAPGP2-201ENST00000557911 754 ntBASIC6.69□□□□□ -1.34
PCDHB11Q9Y5F2 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC6.69□□□□□ -1.34
PCDHB11Q9Y5F2 MIR4271-201ENST00000582451 67 ntBASIC6.69□□□□□ -1.34
PCDHB11Q9Y5F2 AL355598.1-201ENST00000604169 202 ntBASIC6.69□□□□□ -1.34
PCDHB11Q9Y5F2 AC004908.2-201ENST00000609090 574 ntBASIC6.69□□□□□ -1.34
PCDHB11Q9Y5F2 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHB11Q9Y5F2 AL442067.1-201ENST00000613261 223 ntBASIC6.69□□□□□ -1.34
PCDHB11Q9Y5F2 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC6.69□□□□□ -1.34
PCDHB11Q9Y5F2 Six3os1_1.1-201ENST00000620900 87 ntBASIC6.69□□□□□ -1.34
PCDHB11Q9Y5F2 AC005858.3-201ENST00000624756 589 ntBASIC6.69□□□□□ -1.34
PCDHB11Q9Y5F2 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC6.69□□□□□ -1.34
PCDHB11Q9Y5F2 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHB11Q9Y5F2 HSPA8P18-201ENST00000439846 1928 ntBASIC6.69□□□□□ -1.34
PCDHB11Q9Y5F2 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.69□□□□□ -1.34
PCDHB11Q9Y5F2 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHB11Q9Y5F2 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHB11Q9Y5F2 LARS-212ENST00000510191 3737 ntTSL 2 BASIC6.69□□□□□ -1.34
PCDHB11Q9Y5F2 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHB11Q9Y5F2 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHB11Q9Y5F2 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHB11Q9Y5F2 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHB11Q9Y5F2 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
PCDHB11Q9Y5F2 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.69□□□□□ -1.34
PCDHB11Q9Y5F2 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC6.69□□□□□ -1.34
PCDHB11Q9Y5F2 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC6.69□□□□□ -1.34
PCDHB11Q9Y5F2 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC6.69□□□□□ -1.34
PCDHB11Q9Y5F2 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHB11Q9Y5F2 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC6.69□□□□□ -1.34
PCDHB11Q9Y5F2 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHB11Q9Y5F2 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
PCDHB11Q9Y5F2 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
PCDHB11Q9Y5F2 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC6.68□□□□□ -1.34
PCDHB11Q9Y5F2 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
PCDHB11Q9Y5F2 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PCDHB11Q9Y5F2 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PCDHB11Q9Y5F2 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PCDHB11Q9Y5F2 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PCDHB11Q9Y5F2 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PCDHB11Q9Y5F2 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
PCDHB11Q9Y5F2 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PCDHB11Q9Y5F2 AP004289.2-201ENST00000444413 1457 ntBASIC6.68□□□□□ -1.34
PCDHB11Q9Y5F2 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PCDHB11Q9Y5F2 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC6.68□□□□□ -1.34
PCDHB11Q9Y5F2 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PCDHB11Q9Y5F2 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PCDHB11Q9Y5F2 AC127070.3-201ENST00000503695 3263 ntBASIC6.68□□□□□ -1.34
PCDHB11Q9Y5F2 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
PCDHB11Q9Y5F2 RNA5SP382-201ENST00000363355 112 ntBASIC6.68□□□□□ -1.34
PCDHB11Q9Y5F2 RN7SKP250-201ENST00000363924 321 ntBASIC6.68□□□□□ -1.34
PCDHB11Q9Y5F2 Y_RNA.301-201ENST00000364990 103 ntBASIC6.68□□□□□ -1.34
PCDHB11Q9Y5F2 Y_RNA.452-201ENST00000384202 108 ntBASIC6.68□□□□□ -1.34
PCDHB11Q9Y5F2 AC026310.1-201ENST00000396004 378 ntBASIC6.68□□□□□ -1.34
PCDHB11Q9Y5F2 RNU4-14P-201ENST00000410858 122 ntBASIC6.68□□□□□ -1.34
PCDHB11Q9Y5F2 AL133384.1-201ENST00000412744 351 ntBASIC6.68□□□□□ -1.34
PCDHB11Q9Y5F2 AHCYP8-201ENST00000425108 209 ntBASIC6.68□□□□□ -1.34
PCDHB11Q9Y5F2 AC137499.1-201ENST00000427602 88 ntBASIC6.68□□□□□ -1.34
PCDHB11Q9Y5F2 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC6.68□□□□□ -1.34
PCDHB11Q9Y5F2 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
PCDHB11Q9Y5F2 AC083855.1-201ENST00000440041 258 ntBASIC6.68□□□□□ -1.34
PCDHB11Q9Y5F2 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC6.68□□□□□ -1.34
PCDHB11Q9Y5F2 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC6.68□□□□□ -1.34
PCDHB11Q9Y5F2 RPS4XP10-201ENST00000465034 731 ntBASIC6.68□□□□□ -1.34
PCDHB11Q9Y5F2 DUBR-205ENST00000495228 411 ntTSL 2 BASIC6.68□□□□□ -1.34
PCDHB11Q9Y5F2 SNORD27.1-201ENST00000516319 72 ntBASIC6.68□□□□□ -1.34
PCDHB11Q9Y5F2 NARSP2-201ENST00000518524 679 ntBASIC6.68□□□□□ -1.34
PCDHB11Q9Y5F2 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
PCDHB11Q9Y5F2 RPL7P20-201ENST00000520308 745 ntBASIC6.68□□□□□ -1.34
PCDHB11Q9Y5F2 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.68□□□□□ -1.34
PCDHB11Q9Y5F2 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC6.68□□□□□ -1.34
PCDHB11Q9Y5F2 MIR4732-201ENST00000581873 76 ntBASIC6.68□□□□□ -1.34
PCDHB11Q9Y5F2 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC6.68□□□□□ -1.34
PCDHB11Q9Y5F2 RPS4XP21-201ENST00000603814 750 ntBASIC6.68□□□□□ -1.34
PCDHB11Q9Y5F2 CTHRC1P1-201ENST00000605383 469 ntBASIC6.68□□□□□ -1.34
PCDHB11Q9Y5F2 5S_rRNA.23-201ENST00000612086 102 ntBASIC6.68□□□□□ -1.34
PCDHB11Q9Y5F2 AL359757.2-201ENST00000624309 274 ntBASIC6.68□□□□□ -1.34
PCDHB11Q9Y5F2 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6.68□□□□□ -1.34
PCDHB11Q9Y5F2 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC6.68□□□□□ -1.34
PCDHB11Q9Y5F2 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC6.68□□□□□ -1.34
PCDHB11Q9Y5F2 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.68□□□□□ -1.34
PCDHB11Q9Y5F2 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PCDHB11Q9Y5F2 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC6.68□□□□□ -1.34
PCDHB11Q9Y5F2 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
PCDHB11Q9Y5F2 AC116158.1-201ENST00000560231 2129 ntBASIC6.68□□□□□ -1.34
PCDHB11Q9Y5F2 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.68□□□□□ -1.34
PCDHB11Q9Y5F2 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
PCDHB11Q9Y5F2 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
PCDHB11Q9Y5F2 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PCDHB11Q9Y5F2 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC6.68□□□□□ -1.34
PCDHB11Q9Y5F2 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.68□□□□□ -1.34
PCDHB11Q9Y5F2 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PCDHB11Q9Y5F2 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PCDHB11Q9Y5F2 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms