Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC8.69□□□□□ -1.02
RTN4Q9NQC3 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
RTN4Q9NQC3 GNAS-202ENST00000306090 477 ntTSL 5 BASIC8.69□□□□□ -1.02
RTN4Q9NQC3 RNU6-1249P-201ENST00000363237 111 ntBASIC8.69□□□□□ -1.02
RTN4Q9NQC3 RNU6-1155P-201ENST00000363554 107 ntBASIC8.69□□□□□ -1.02
RTN4Q9NQC3 SNORD113-7-201ENST00000363762 77 ntBASIC8.69□□□□□ -1.02
RTN4Q9NQC3 COX7A2-201ENST00000370081 914 ntAPPRIS P2 TSL 3 BASIC8.69□□□□□ -1.02
RTN4Q9NQC3 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
RTN4Q9NQC3 Y_RNA.576-201ENST00000384781 102 ntBASIC8.69□□□□□ -1.02
RTN4Q9NQC3 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
RTN4Q9NQC3 SEC61G-202ENST00000395535 459 ntAPPRIS P1 TSL 2 BASIC8.69□□□□□ -1.02
RTN4Q9NQC3 RAB28P1-201ENST00000411517 641 ntBASIC8.69□□□□□ -1.02
RTN4Q9NQC3 EIF4A1P3-201ENST00000411521 244 ntBASIC8.69□□□□□ -1.02
RTN4Q9NQC3 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC8.69□□□□□ -1.02
RTN4Q9NQC3 AC099677.1-201ENST00000420575 175 ntBASIC8.69□□□□□ -1.02
RTN4Q9NQC3 RPL7P46-201ENST00000425129 740 ntBASIC8.69□□□□□ -1.02
RTN4Q9NQC3 TEX41-206ENST00000432608 661 ntTSL 3 BASIC8.69□□□□□ -1.02
RTN4Q9NQC3 AL589765.3-201ENST00000446084 462 ntBASIC8.69□□□□□ -1.02
RTN4Q9NQC3 AL109945.1-201ENST00000448134 687 ntTSL 2 BASIC8.69□□□□□ -1.02
RTN4Q9NQC3 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC8.69□□□□□ -1.02
RTN4Q9NQC3 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC8.69□□□□□ -1.02
RTN4Q9NQC3 RN7SL130P-201ENST00000489463 305 ntBASIC8.69□□□□□ -1.02
RTN4Q9NQC3 RN7SL416P-201ENST00000494042 298 ntBASIC8.69□□□□□ -1.02
RTN4Q9NQC3 AL031073.1-201ENST00000503029 1139 ntBASIC8.69□□□□□ -1.02
RTN4Q9NQC3 NARSP2-201ENST00000518524 679 ntBASIC8.69□□□□□ -1.02
RTN4Q9NQC3 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC8.69□□□□□ -1.02
RTN4Q9NQC3 AP001922.2-201ENST00000530435 390 ntTSL 3 BASIC8.69□□□□□ -1.02
RTN4Q9NQC3 NELL2-211ENST00000548826 559 ntTSL 2 BASIC8.69□□□□□ -1.02
RTN4Q9NQC3 BICD1-206ENST00000551086 423 ntTSL 3 BASIC8.69□□□□□ -1.02
RTN4Q9NQC3 AC034102.1-201ENST00000552016 604 ntBASIC8.69□□□□□ -1.02
RTN4Q9NQC3 AC004241.1-203ENST00000552502 460 ntTSL 3 BASIC8.69□□□□□ -1.02
RTN4Q9NQC3 AL136018.1-202ENST00000555300 488 ntTSL 5 BASIC8.69□□□□□ -1.02
RTN4Q9NQC3 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC8.69□□□□□ -1.02
RTN4Q9NQC3 AC007375.2-201ENST00000557752 603 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
RTN4Q9NQC3 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC8.69□□□□□ -1.02
RTN4Q9NQC3 U1.22-201ENST00000605806 164 ntBASIC8.69□□□□□ -1.02
RTN4Q9NQC3 AP001521.2-201ENST00000608772 546 ntBASIC8.69□□□□□ -1.02
RTN4Q9NQC3 AC092807.2-201ENST00000609367 243 ntBASIC8.69□□□□□ -1.02
RTN4Q9NQC3 AC007998.5-201ENST00000622938 237 ntBASIC8.69□□□□□ -1.02
RTN4Q9NQC3 AC243312.2-201ENST00000623340 601 ntBASIC8.69□□□□□ -1.02
RTN4Q9NQC3 AC005691.1-201ENST00000624723 401 ntBASIC8.69□□□□□ -1.02
RTN4Q9NQC3 LINC01620-205ENST00000637248 546 ntTSL 4 BASIC8.69□□□□□ -1.02
RTN4Q9NQC3 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC8.69□□□□□ -1.02
RTN4Q9NQC3 PCDH18-205ENST00000511115 1331 ntTSL 2 BASIC8.69□□□□□ -1.02
RTN4Q9NQC3 FRMD7-203ENST00000464296 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
RTN4Q9NQC3 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
RTN4Q9NQC3 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
RTN4Q9NQC3 LINC01427-202ENST00000635258 4566 ntTSL 5 BASIC8.69□□□□□ -1.02
RTN4Q9NQC3 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC8.69□□□□□ -1.02
RTN4Q9NQC3 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
RTN4Q9NQC3 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC8.69□□□□□ -1.02
RTN4Q9NQC3 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC8.69□□□□□ -1.02
RTN4Q9NQC3 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
RTN4Q9NQC3 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
RTN4Q9NQC3 RNU6-188P-201ENST00000364207 107 ntBASIC8.68□□□□□ -1.02
RTN4Q9NQC3 TRAV8-3-201ENST00000390435 341 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
RTN4Q9NQC3 SOD2P1-201ENST00000396543 562 ntBASIC8.68□□□□□ -1.02
RTN4Q9NQC3 AL080285.1-201ENST00000404225 984 ntBASIC8.68□□□□□ -1.02
RTN4Q9NQC3 RPE-204ENST00000411934 792 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
RTN4Q9NQC3 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC8.68□□□□□ -1.02
RTN4Q9NQC3 LINC00853-201ENST00000429328 661 ntTSL 2 BASIC8.68□□□□□ -1.02
RTN4Q9NQC3 OR10G8-201ENST00000431524 1045 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
RTN4Q9NQC3 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
RTN4Q9NQC3 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC8.68□□□□□ -1.02
RTN4Q9NQC3 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC8.68□□□□□ -1.02
RTN4Q9NQC3 DDX3X-202ENST00000441189 1051 ntTSL 2 BASIC8.68□□□□□ -1.02
RTN4Q9NQC3 Y_RNA.632-201ENST00000459189 102 ntBASIC8.68□□□□□ -1.02
RTN4Q9NQC3 RN7SL740P-201ENST00000467060 344 ntBASIC8.68□□□□□ -1.02
RTN4Q9NQC3 AL122013.1-201ENST00000473054 801 ntBASIC8.68□□□□□ -1.02
RTN4Q9NQC3 RN7SL77P-201ENST00000473332 294 ntBASIC8.68□□□□□ -1.02
RTN4Q9NQC3 RN7SL333P-201ENST00000476398 297 ntBASIC8.68□□□□□ -1.02
RTN4Q9NQC3 RPL17P37-201ENST00000490729 548 ntBASIC8.68□□□□□ -1.02
RTN4Q9NQC3 PPP4R2-207ENST00000495566 559 ntTSL 3 BASIC8.68□□□□□ -1.02
RTN4Q9NQC3 RNU6-1170P-201ENST00000515974 106 ntBASIC8.68□□□□□ -1.02
RTN4Q9NQC3 HPRT1P3-201ENST00000539521 576 ntBASIC8.68□□□□□ -1.02
RTN4Q9NQC3 CIPC-206ENST00000555611 599 ntTSL 4 BASIC8.68□□□□□ -1.02
RTN4Q9NQC3 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC8.68□□□□□ -1.02
RTN4Q9NQC3 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC8.68□□□□□ -1.02
RTN4Q9NQC3 ZNF677-208ENST00000599012 796 ntTSL 3 BASIC8.68□□□□□ -1.02
RTN4Q9NQC3 AL021878.2-201ENST00000602718 399 ntBASIC8.68□□□□□ -1.02
RTN4Q9NQC3 AC084876.1-201ENST00000612793 641 ntBASIC8.68□□□□□ -1.02
RTN4Q9NQC3 AL592227.1-201ENST00000614748 126 ntBASIC8.68□□□□□ -1.02
RTN4Q9NQC3 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC8.68□□□□□ -1.02
RTN4Q9NQC3 CLEC19A-205ENST00000636231 561 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
RTN4Q9NQC3 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC8.68□□□□□ -1.02
RTN4Q9NQC3 LARP1BP1-201ENST00000506036 1359 ntBASIC8.68□□□□□ -1.02
RTN4Q9NQC3 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
RTN4Q9NQC3 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
RTN4Q9NQC3 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
RTN4Q9NQC3 AL021877.2-201ENST00000624442 10684 ntBASIC8.67□□□□□ -1.02
RTN4Q9NQC3 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
RTN4Q9NQC3 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC8.67□□□□□ -1.02
RTN4Q9NQC3 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
RTN4Q9NQC3 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
RTN4Q9NQC3 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
RTN4Q9NQC3 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
RTN4Q9NQC3 Y_RNA.162-201ENST00000363683 102 ntBASIC8.67□□□□□ -1.02
RTN4Q9NQC3 RNU6-263P-201ENST00000363811 107 ntBASIC8.67□□□□□ -1.02
RTN4Q9NQC3 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
RTN4Q9NQC3 RNA5SP256-201ENST00000390978 113 ntBASIC8.67□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms