Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC007497.1-201ENST00000610421 561 ntBASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 AC073593.1-201ENST00000624500 411 ntBASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 AC019080.5-201ENST00000624891 757 ntBASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 AC006065.6-201ENST00000625201 545 ntBASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 LINC00622-201ENST00000562811 1570 ntBASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC2.19□□□□□ -2.06
CHKB-CPT1BH3BT56 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 GTF2H2B-203ENST00000508065 1432 ntBASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 RNA5SP189-201ENST00000364920 115 ntBASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 PPCS-201ENST00000372556 984 ntTSL 2 BASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 SDHCP2-201ENST00000398565 501 ntBASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 RPL37P18-201ENST00000411602 243 ntBASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 AMMECR1LP1-201ENST00000415152 841 ntBASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 NDUFB4P5-201ENST00000415445 361 ntBASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 AL359885.1-201ENST00000415786 903 ntBASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 AL513325.1-201ENST00000417716 1034 ntBASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 SDCBPP3-201ENST00000419629 891 ntBASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 RPL7AP25-201ENST00000423357 805 ntBASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 AC012498.1-201ENST00000424037 437 ntBASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 HNRNPA3P4-201ENST00000427514 803 ntBASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 NPM1P24-201ENST00000428039 894 ntBASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 AC002504.1-201ENST00000438281 691 ntBASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 AC009969.1-201ENST00000438726 172 ntBASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 AL662791.1-201ENST00000441992 928 ntBASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 RANP1-206ENST00000455094 651 ntBASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 RPS5P7-201ENST00000456664 608 ntBASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 RPL7P22-201ENST00000466005 733 ntBASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 RPS27AP1-201ENST00000475545 471 ntBASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 AC012181.1-201ENST00000479895 423 ntBASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 RPL7P39-201ENST00000481157 744 ntBASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 PSMA2P2-201ENST00000504319 686 ntBASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 AC114967.1-201ENST00000504890 259 ntBASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 AC134698.1-201ENST00000511619 643 ntBASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 AC108471.1-201ENST00000513977 287 ntBASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 RGS5-219ENST00000528019 512 ntTSL 4 BASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 AC027544.3-201ENST00000535082 757 ntBASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 MIR3154-201ENST00000577829 84 ntBASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 SNURF-202ENST00000577949 650 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 RNA5SP108-201ENST00000605921 117 ntBASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 AP001521.2-201ENST00000608772 546 ntBASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 U91328.4-201ENST00000608919 517 ntBASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 AC109309.2-201ENST00000612597 332 ntBASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 KDM5DP1-201ENST00000622542 298 ntBASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 AP005264.7-201ENST00000625003 745 ntBASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 U3.53-201ENST00000628922 216 ntBASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 ZNRD1ASP-221ENST00000637794 1074 ntBASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 RFC1-217ENST00000639695 867 ntTSL 5 BASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 CASC19-274ENST00000642018 970 ntBASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 ZNF137P-201ENST00000456718 1920 ntBASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 Z82195.2-201ENST00000612348 18351 ntBASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC2.18□□□□□ -2.06
CHKB-CPT1BH3BT56 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
CHKB-CPT1BH3BT56 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms