Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 MBL2-201ENST00000373968 3569 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
LRCH3Q96II8 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
LRCH3Q96II8 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC7.49□□□□□ -1.21
LRCH3Q96II8 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
LRCH3Q96II8 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC7.49□□□□□ -1.21
LRCH3Q96II8 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC7.49□□□□□ -1.21
LRCH3Q96II8 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC7.49□□□□□ -1.21
LRCH3Q96II8 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC7.49□□□□□ -1.21
LRCH3Q96II8 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
LRCH3Q96II8 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
LRCH3Q96II8 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC7.49□□□□□ -1.21
LRCH3Q96II8 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
LRCH3Q96II8 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC7.49□□□□□ -1.21
LRCH3Q96II8 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC7.49□□□□□ -1.21
LRCH3Q96II8 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
LRCH3Q96II8 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
LRCH3Q96II8 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC7.48□□□□□ -1.21
LRCH3Q96II8 AC092125.1-201ENST00000562568 1995 ntBASIC7.48□□□□□ -1.21
LRCH3Q96II8 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
LRCH3Q96II8 FRMD7-203ENST00000464296 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
LRCH3Q96II8 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
LRCH3Q96II8 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC7.48□□□□□ -1.21
LRCH3Q96II8 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
LRCH3Q96II8 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
LRCH3Q96II8 RNY4P16-201ENST00000364768 94 ntBASIC7.48□□□□□ -1.21
LRCH3Q96II8 AL359715.1-201ENST00000404330 555 ntBASIC7.48□□□□□ -1.21
LRCH3Q96II8 AL512329.1-201ENST00000404600 1592 ntBASIC7.48□□□□□ -1.21
LRCH3Q96II8 BX323014.1-201ENST00000412876 237 ntBASIC7.48□□□□□ -1.21
LRCH3Q96II8 AC048351.1-201ENST00000420064 602 ntBASIC7.48□□□□□ -1.21
LRCH3Q96II8 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
LRCH3Q96II8 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC7.48□□□□□ -1.21
LRCH3Q96II8 AC074286.1-202ENST00000441205 567 ntTSL 5 BASIC7.48□□□□□ -1.21
LRCH3Q96II8 AC105399.1-202ENST00000447303 205 ntBASIC7.48□□□□□ -1.21
LRCH3Q96II8 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC7.48□□□□□ -1.21
LRCH3Q96II8 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC7.48□□□□□ -1.21
LRCH3Q96II8 RN7SL654P-201ENST00000479178 292 ntBASIC7.48□□□□□ -1.21
LRCH3Q96II8 MORC1-202ENST00000483760 3056 ntAPPRIS ALT2 TSL 2 BASIC7.48□□□□□ -1.21
LRCH3Q96II8 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC7.48□□□□□ -1.21
LRCH3Q96II8 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC7.48□□□□□ -1.21
LRCH3Q96II8 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC7.48□□□□□ -1.21
LRCH3Q96II8 RNU6-699P-201ENST00000517081 110 ntBASIC7.48□□□□□ -1.21
LRCH3Q96II8 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC7.48□□□□□ -1.21
LRCH3Q96II8 AP000763.2-201ENST00000540641 163 ntBASIC7.48□□□□□ -1.21
LRCH3Q96II8 AC007068.2-201ENST00000543168 395 ntBASIC7.48□□□□□ -1.21
LRCH3Q96II8 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC7.48□□□□□ -1.21
LRCH3Q96II8 MED21-206ENST00000546323 575 ntTSL 3 BASIC7.48□□□□□ -1.21
LRCH3Q96II8 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC7.48□□□□□ -1.21
LRCH3Q96II8 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
LRCH3Q96II8 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC7.48□□□□□ -1.21
LRCH3Q96II8 MIR4489-201ENST00000578869 62 ntBASIC7.48□□□□□ -1.21
LRCH3Q96II8 MIR3133-201ENST00000583157 78 ntBASIC7.48□□□□□ -1.21
LRCH3Q96II8 MIR3672-201ENST00000584290 82 ntBASIC7.48□□□□□ -1.21
LRCH3Q96II8 AC009955.2-201ENST00000597288 542 ntBASIC7.48□□□□□ -1.21
LRCH3Q96II8 AC010201.1-201ENST00000605051 540 ntBASIC7.48□□□□□ -1.21
LRCH3Q96II8 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC7.48□□□□□ -1.21
LRCH3Q96II8 AC023509.5-201ENST00000617434 807 ntBASIC7.48□□□□□ -1.21
LRCH3Q96II8 AL731566.2-201ENST00000618971 317 ntBASIC7.48□□□□□ -1.21
LRCH3Q96II8 AC061999.1-201ENST00000624454 177 ntBASIC7.48□□□□□ -1.21
LRCH3Q96II8 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
LRCH3Q96II8 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
LRCH3Q96II8 LDHA-204ENST00000396222 1766 ntTSL 2 BASIC7.48□□□□□ -1.21
LRCH3Q96II8 RGS6-205ENST00000406236 1476 ntAPPRIS ALT1 TSL 1 (best) BASIC7.48□□□□□ -1.21
LRCH3Q96II8 THUMPD3P1-201ENST00000506556 1480 ntBASIC7.48□□□□□ -1.21
LRCH3Q96II8 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC7.48□□□□□ -1.21
LRCH3Q96II8 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC7.48□□□□□ -1.21
LRCH3Q96II8 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC7.48□□□□□ -1.21
LRCH3Q96II8 FSTL5-203ENST00000427802 2920 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
LRCH3Q96II8 OR4D10-201ENST00000530162 2482 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
LRCH3Q96II8 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
LRCH3Q96II8 WDR95P-201ENST00000425638 1542 ntBASIC7.47□□□□□ -1.21
LRCH3Q96II8 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
LRCH3Q96II8 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC7.47□□□□□ -1.21
LRCH3Q96II8 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
LRCH3Q96II8 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC7.47□□□□□ -1.21
LRCH3Q96II8 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
LRCH3Q96II8 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC7.47□□□□□ -1.21
LRCH3Q96II8 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC7.47□□□□□ -1.21
LRCH3Q96II8 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
LRCH3Q96II8 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
LRCH3Q96II8 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC7.47□□□□□ -1.21
LRCH3Q96II8 AC011416.1-201ENST00000514947 1732 ntBASIC7.47□□□□□ -1.21
LRCH3Q96II8 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC7.47□□□□□ -1.21
LRCH3Q96II8 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC7.47□□□□□ -1.21
LRCH3Q96II8 AC011447.6-201ENST00000623510 2598 ntBASIC7.47□□□□□ -1.21
LRCH3Q96II8 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
LRCH3Q96II8 AC091812.1-201ENST00000432235 1948 ntBASIC7.47□□□□□ -1.21
LRCH3Q96II8 OR51E2-201ENST00000396950 2781 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
LRCH3Q96II8 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC7.47□□□□□ -1.21
LRCH3Q96II8 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
LRCH3Q96II8 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
LRCH3Q96II8 Y_RNA.14-201ENST00000362415 103 ntBASIC7.47□□□□□ -1.21
LRCH3Q96II8 RNU6-1159P-201ENST00000362933 107 ntBASIC7.47□□□□□ -1.21
LRCH3Q96II8 Y_RNA.152-201ENST00000363578 100 ntBASIC7.47□□□□□ -1.21
LRCH3Q96II8 SNORD113-7-201ENST00000363762 77 ntBASIC7.47□□□□□ -1.21
LRCH3Q96II8 Y_RNA.210-201ENST00000364161 110 ntBASIC7.47□□□□□ -1.21
LRCH3Q96II8 RNA5SP242-201ENST00000364171 118 ntBASIC7.47□□□□□ -1.21
LRCH3Q96II8 MT-TW-201ENST00000387382 68 ntBASIC7.47□□□□□ -1.21
LRCH3Q96II8 RNA5SP105-201ENST00000391123 113 ntBASIC7.47□□□□□ -1.21
LRCH3Q96II8 RNU6-903P-201ENST00000391270 109 ntBASIC7.47□□□□□ -1.21
LRCH3Q96II8 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC7.47□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms