Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 EIF4EBP2P3-201ENST00000403144 334 ntBASIC5.55□□□□□ -1.52
CLTCL1P53675 SNORA3C-201ENST00000408792 125 ntBASIC5.55□□□□□ -1.52
CLTCL1P53675 RN7SKP199-201ENST00000410325 305 ntBASIC5.55□□□□□ -1.52
CLTCL1P53675 AL159987.2-201ENST00000432754 307 ntBASIC5.55□□□□□ -1.52
CLTCL1P53675 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC5.55□□□□□ -1.52
CLTCL1P53675 RPL7P49-201ENST00000471402 708 ntBASIC5.55□□□□□ -1.52
CLTCL1P53675 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC5.55□□□□□ -1.52
CLTCL1P53675 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC5.55□□□□□ -1.52
CLTCL1P53675 STX3-204ENST00000530221 534 ntTSL 5 BASIC5.55□□□□□ -1.52
CLTCL1P53675 OR51C1P-202ENST00000641159 1444 ntBASIC5.55□□□□□ -1.52
CLTCL1P53675 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CLTCL1P53675 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CLTCL1P53675 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLTCL1P53675 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CLTCL1P53675 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CLTCL1P53675 MAPK10-303ENST00000641324 3959 ntBASIC5.54□□□□□ -1.52
CLTCL1P53675 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CLTCL1P53675 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CLTCL1P53675 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC5.54□□□□□ -1.52
CLTCL1P53675 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CLTCL1P53675 RPL7P60-201ENST00000397636 735 ntBASIC5.54□□□□□ -1.52
CLTCL1P53675 ATP5A1P2-201ENST00000412323 255 ntBASIC5.54□□□□□ -1.52
CLTCL1P53675 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC5.54□□□□□ -1.52
CLTCL1P53675 MTND2P15-201ENST00000418575 892 ntBASIC5.54□□□□□ -1.52
CLTCL1P53675 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC5.54□□□□□ -1.52
CLTCL1P53675 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC5.54□□□□□ -1.52
CLTCL1P53675 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC5.54□□□□□ -1.52
CLTCL1P53675 AL451050.1-201ENST00000450126 415 ntBASIC5.54□□□□□ -1.52
CLTCL1P53675 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CLTCL1P53675 DUXAP2-201ENST00000519198 589 ntBASIC5.54□□□□□ -1.52
CLTCL1P53675 AC022695.1-201ENST00000522089 237 ntBASIC5.54□□□□□ -1.52
CLTCL1P53675 AC007342.8-201ENST00000623278 678 ntBASIC5.54□□□□□ -1.52
CLTCL1P53675 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
CLTCL1P53675 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLTCL1P53675 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CLTCL1P53675 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CLTCL1P53675 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CLTCL1P53675 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CLTCL1P53675 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CLTCL1P53675 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CLTCL1P53675 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC5.53□□□□□ -1.52
CLTCL1P53675 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLTCL1P53675 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLTCL1P53675 Z82217.1-201ENST00000625157 8149 ntBASIC5.53□□□□□ -1.52
CLTCL1P53675 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLTCL1P53675 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC5.53□□□□□ -1.52
CLTCL1P53675 ZNF736P2Y-201ENST00000416040 1279 ntBASIC5.53□□□□□ -1.52
CLTCL1P53675 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC5.53□□□□□ -1.52
CLTCL1P53675 AL390879.2-203ENST00000426943 1121 ntBASIC5.53□□□□□ -1.52
CLTCL1P53675 RPL7P4-203ENST00000430239 730 ntBASIC5.53□□□□□ -1.52
CLTCL1P53675 HLA-N-201ENST00000437516 135 ntBASIC5.53□□□□□ -1.52
CLTCL1P53675 RPS3AP46-201ENST00000448352 682 ntBASIC5.53□□□□□ -1.52
CLTCL1P53675 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC5.53□□□□□ -1.52
CLTCL1P53675 SRGNP1-201ENST00000603392 451 ntBASIC5.53□□□□□ -1.52
CLTCL1P53675 AC096553.1-201ENST00000605169 829 ntBASIC5.53□□□□□ -1.52
CLTCL1P53675 U3.45-201ENST00000607547 219 ntBASIC5.53□□□□□ -1.52
CLTCL1P53675 AC119674.1-207ENST00000641355 633 ntBASIC5.53□□□□□ -1.52
CLTCL1P53675 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLTCL1P53675 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLTCL1P53675 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLTCL1P53675 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
CLTCL1P53675 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLTCL1P53675 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC5.53□□□□□ -1.52
CLTCL1P53675 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLTCL1P53675 MAPK10-320ENST00000641462 6696 ntBASIC5.53□□□□□ -1.52
CLTCL1P53675 PAPPA-AS1-201ENST00000445861 2450 ntBASIC5.53□□□□□ -1.52
CLTCL1P53675 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLTCL1P53675 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
CLTCL1P53675 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLTCL1P53675 MIR1251-201ENST00000408552 70 ntBASIC5.52□□□□□ -1.53
CLTCL1P53675 CYCSP10-201ENST00000417973 294 ntBASIC5.52□□□□□ -1.53
CLTCL1P53675 KRR1P1-201ENST00000419430 803 ntBASIC5.52□□□□□ -1.53
CLTCL1P53675 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CLTCL1P53675 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC5.52□□□□□ -1.53
CLTCL1P53675 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC5.52□□□□□ -1.53
CLTCL1P53675 RPS26P28-201ENST00000470806 348 ntBASIC5.52□□□□□ -1.53
CLTCL1P53675 NPM1P29-201ENST00000483112 803 ntBASIC5.52□□□□□ -1.53
CLTCL1P53675 AC005726.1-201ENST00000494679 427 ntBASIC5.52□□□□□ -1.53
CLTCL1P53675 SCARNA13-201ENST00000516672 275 ntBASIC5.52□□□□□ -1.53
CLTCL1P53675 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.52□□□□□ -1.53
CLTCL1P53675 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CLTCL1P53675 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC5.52□□□□□ -1.53
CLTCL1P53675 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5.52□□□□□ -1.53
CLTCL1P53675 AL583832.1-201ENST00000603227 784 ntBASIC5.52□□□□□ -1.53
CLTCL1P53675 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLTCL1P53675 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.52□□□□□ -1.53
CLTCL1P53675 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.52□□□□□ -1.53
CLTCL1P53675 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLTCL1P53675 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CLTCL1P53675 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CLTCL1P53675 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CLTCL1P53675 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLTCL1P53675 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLTCL1P53675 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLTCL1P53675 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.52□□□□□ -1.53
CLTCL1P53675 HDGFP1-201ENST00000405943 252 ntBASIC5.52□□□□□ -1.53
CLTCL1P53675 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC5.52□□□□□ -1.53
CLTCL1P53675 NPM1P25-201ENST00000429734 854 ntBASIC5.52□□□□□ -1.53
CLTCL1P53675 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC5.52□□□□□ -1.53
CLTCL1P53675 AC069240.1-201ENST00000548774 375 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms