Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PDX1P52945 YWHAZP1-201ENST00000556286 722 ntBASIC4.5□□□□□ -1.69
PDX1P52945 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.5□□□□□ -1.69
PDX1P52945 AC074050.1-201ENST00000563247 211 ntBASIC4.5□□□□□ -1.69
PDX1P52945 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.5□□□□□ -1.69
PDX1P52945 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
PDX1P52945 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.5□□□□□ -1.69
PDX1P52945 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.5□□□□□ -1.69
PDX1P52945 AC090525.3-201ENST00000605601 189 ntBASIC4.5□□□□□ -1.69
PDX1P52945 OR2BH1P-201ENST00000608850 864 ntBASIC4.5□□□□□ -1.69
PDX1P52945 AC012409.3-201ENST00000611343 981 ntBASIC4.5□□□□□ -1.69
PDX1P52945 AC126544.2-201ENST00000625174 749 ntBASIC4.5□□□□□ -1.69
PDX1P52945 AL445984.1-201ENST00000637834 659 ntBASIC4.5□□□□□ -1.69
PDX1P52945 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PDX1P52945 AC107068.1-201ENST00000563286 4218 ntBASIC4.5□□□□□ -1.69
PDX1P52945 SAMMSON-213ENST00000641336 1521 ntBASIC4.5□□□□□ -1.69
PDX1P52945 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
PDX1P52945 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.5□□□□□ -1.69
PDX1P52945 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PDX1P52945 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PDX1P52945 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PDX1P52945 SALL4P2-201ENST00000423288 2910 ntBASIC4.49□□□□□ -1.69
PDX1P52945 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
PDX1P52945 OR14L1P-202ENST00000641545 3009 ntBASIC4.49□□□□□ -1.69
PDX1P52945 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PDX1P52945 MTCO1P18-201ENST00000455518 1419 ntBASIC4.49□□□□□ -1.69
PDX1P52945 GTF2H2B-203ENST00000508065 1432 ntBASIC4.49□□□□□ -1.69
PDX1P52945 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
PDX1P52945 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PDX1P52945 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PDX1P52945 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PDX1P52945 RN7SKP227-201ENST00000364445 330 ntBASIC4.49□□□□□ -1.69
PDX1P52945 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PDX1P52945 U3.35-201ENST00000408405 208 ntBASIC4.49□□□□□ -1.69
PDX1P52945 RN7SKP267-201ENST00000410381 285 ntBASIC4.49□□□□□ -1.69
PDX1P52945 VTA1P1-201ENST00000414044 866 ntBASIC4.49□□□□□ -1.69
PDX1P52945 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC4.49□□□□□ -1.69
PDX1P52945 E2F6P2-201ENST00000420708 748 ntBASIC4.49□□□□□ -1.69
PDX1P52945 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.49□□□□□ -1.69
PDX1P52945 DEFB130D-201ENST00000426866 237 ntBASIC4.49□□□□□ -1.69
PDX1P52945 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.49□□□□□ -1.69
PDX1P52945 AC011242.1-201ENST00000433596 1158 ntBASIC4.49□□□□□ -1.69
PDX1P52945 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC4.49□□□□□ -1.69
PDX1P52945 FHP1-201ENST00000442741 703 ntBASIC4.49□□□□□ -1.69
PDX1P52945 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.49□□□□□ -1.69
PDX1P52945 AL096803.2-201ENST00000450032 677 ntBASIC4.49□□□□□ -1.69
PDX1P52945 RNU7-27P-201ENST00000459281 62 ntBASIC4.49□□□□□ -1.69
PDX1P52945 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
PDX1P52945 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
PDX1P52945 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.49□□□□□ -1.69
PDX1P52945 AC020890.1-201ENST00000491837 504 ntBASIC4.49□□□□□ -1.69
PDX1P52945 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.49□□□□□ -1.69
PDX1P52945 SCARNA1-201ENST00000517138 166 ntBASIC4.49□□□□□ -1.69
PDX1P52945 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.49□□□□□ -1.69
PDX1P52945 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.49□□□□□ -1.69
PDX1P52945 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.49□□□□□ -1.69
PDX1P52945 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.49□□□□□ -1.69
PDX1P52945 AP003717.3-201ENST00000544832 1180 ntBASIC4.49□□□□□ -1.69
PDX1P52945 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.49□□□□□ -1.69
PDX1P52945 AL390334.1-201ENST00000556395 450 ntBASIC4.49□□□□□ -1.69
PDX1P52945 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC4.49□□□□□ -1.69
PDX1P52945 DPRXP4-201ENST00000578053 568 ntBASIC4.49□□□□□ -1.69
PDX1P52945 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.49□□□□□ -1.69
PDX1P52945 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PDX1P52945 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.49□□□□□ -1.69
PDX1P52945 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.49□□□□□ -1.69
PDX1P52945 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC4.49□□□□□ -1.69
PDX1P52945 AL133338.2-201ENST00000604292 736 ntBASIC4.49□□□□□ -1.69
PDX1P52945 AC016597.2-201ENST00000613256 341 ntBASIC4.49□□□□□ -1.69
PDX1P52945 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.49□□□□□ -1.69
PDX1P52945 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.49□□□□□ -1.69
PDX1P52945 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PDX1P52945 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PDX1P52945 HSPD1P14-201ENST00000432666 1618 ntBASIC4.49□□□□□ -1.69
PDX1P52945 AC010300.1-201ENST00000600671 5134 ntBASIC4.49□□□□□ -1.69
PDX1P52945 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
PDX1P52945 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.49□□□□□ -1.69
PDX1P52945 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PDX1P52945 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PDX1P52945 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PDX1P52945 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
PDX1P52945 ZNF137P-201ENST00000456718 1920 ntBASIC4.48□□□□□ -1.69
PDX1P52945 AL731566.1-201ENST00000620490 1937 ntBASIC4.48□□□□□ -1.69
PDX1P52945 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PDX1P52945 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PDX1P52945 AL672167.1-205ENST00000641112 3080 ntBASIC4.48□□□□□ -1.69
PDX1P52945 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PDX1P52945 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PDX1P52945 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PDX1P52945 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.48□□□□□ -1.69
PDX1P52945 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.48□□□□□ -1.69
PDX1P52945 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.48□□□□□ -1.69
PDX1P52945 AC021146.4-201ENST00000309229 279 ntBASIC4.48□□□□□ -1.69
PDX1P52945 RNU5B-4P-201ENST00000363508 111 ntBASIC4.48□□□□□ -1.69
PDX1P52945 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
PDX1P52945 AL590762.2-201ENST00000395798 571 ntBASIC4.48□□□□□ -1.69
PDX1P52945 AP002784.2-201ENST00000397300 549 ntBASIC4.48□□□□□ -1.69
PDX1P52945 AC105402.1-201ENST00000413336 545 ntBASIC4.48□□□□□ -1.69
PDX1P52945 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC4.48□□□□□ -1.69
PDX1P52945 AC073310.1-201ENST00000423226 1033 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms