Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AL591926.1-201ENST00000620542 217 ntBASIC4.6□□□□□ -1.67
SOX2P48431 AP001005.3-201ENST00000622049 129 ntBASIC4.6□□□□□ -1.67
SOX2P48431 AC124312.6-202ENST00000623624 418 ntBASIC4.6□□□□□ -1.67
SOX2P48431 AC098679.5-201ENST00000624394 571 ntBASIC4.6□□□□□ -1.67
SOX2P48431 CASC19-222ENST00000641321 1173 ntBASIC4.6□□□□□ -1.67
SOX2P48431 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SOX2P48431 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.6□□□□□ -1.67
SOX2P48431 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SOX2P48431 AL390862.1-201ENST00000635467 1469 ntBASIC4.6□□□□□ -1.67
SOX2P48431 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.6□□□□□ -1.67
SOX2P48431 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
SOX2P48431 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.6□□□□□ -1.67
SOX2P48431 AC093775.1-201ENST00000624154 1868 ntBASIC4.6□□□□□ -1.67
SOX2P48431 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SOX2P48431 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SOX2P48431 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.6□□□□□ -1.67
SOX2P48431 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
SOX2P48431 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
SOX2P48431 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SOX2P48431 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
SOX2P48431 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
SOX2P48431 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SOX2P48431 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SOX2P48431 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
SOX2P48431 AC008549.2-201ENST00000333482 706 ntBASIC4.59□□□□□ -1.67
SOX2P48431 RNU5D-1-201ENST00000363299 116 ntBASIC4.59□□□□□ -1.67
SOX2P48431 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.59□□□□□ -1.67
SOX2P48431 SNORD116-4-201ENST00000384733 96 ntBASIC4.59□□□□□ -1.67
SOX2P48431 AL133388.1-201ENST00000404509 287 ntBASIC4.59□□□□□ -1.67
SOX2P48431 TPT1P2-201ENST00000413105 503 ntBASIC4.59□□□□□ -1.67
SOX2P48431 OR2AT2P-201ENST00000413438 905 ntBASIC4.59□□□□□ -1.67
SOX2P48431 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.59□□□□□ -1.67
SOX2P48431 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.59□□□□□ -1.67
SOX2P48431 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC4.59□□□□□ -1.67
SOX2P48431 P2RY10P2-201ENST00000416730 913 ntBASIC4.59□□□□□ -1.67
SOX2P48431 TIMM9P2-201ENST00000419324 266 ntBASIC4.59□□□□□ -1.67
SOX2P48431 EIF4A1P7-201ENST00000421800 1220 ntBASIC4.59□□□□□ -1.67
SOX2P48431 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.59□□□□□ -1.67
SOX2P48431 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
SOX2P48431 CLUHP1-201ENST00000435012 1190 ntBASIC4.59□□□□□ -1.67
SOX2P48431 MTCO2P16-201ENST00000436962 677 ntBASIC4.59□□□□□ -1.67
SOX2P48431 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SOX2P48431 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC4.59□□□□□ -1.67
SOX2P48431 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.59□□□□□ -1.67
SOX2P48431 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.59□□□□□ -1.67
SOX2P48431 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
SOX2P48431 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC4.59□□□□□ -1.67
SOX2P48431 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.59□□□□□ -1.67
SOX2P48431 RPL12P26-201ENST00000452430 487 ntBASIC4.59□□□□□ -1.67
SOX2P48431 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.59□□□□□ -1.67
SOX2P48431 RPS4XP12-201ENST00000461747 709 ntBASIC4.59□□□□□ -1.67
SOX2P48431 RPL7P1-201ENST00000468161 747 ntBASIC4.59□□□□□ -1.67
SOX2P48431 RPL7P9-201ENST00000468715 747 ntBASIC4.59□□□□□ -1.67
SOX2P48431 CBX1-205ENST00000495350 550 ntTSL 2 BASIC4.59□□□□□ -1.67
SOX2P48431 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.59□□□□□ -1.67
SOX2P48431 AC080014.1-201ENST00000496877 1201 ntBASIC4.59□□□□□ -1.67
SOX2P48431 SETP14-201ENST00000497538 873 ntBASIC4.59□□□□□ -1.67
SOX2P48431 AC005178.1-201ENST00000508392 440 ntBASIC4.59□□□□□ -1.67
SOX2P48431 AC008885.2-201ENST00000509506 930 ntBASIC4.59□□□□□ -1.67
SOX2P48431 MTCYBP37-201ENST00000510642 1133 ntBASIC4.59□□□□□ -1.67
SOX2P48431 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
SOX2P48431 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.59□□□□□ -1.67
SOX2P48431 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC4.59□□□□□ -1.67
SOX2P48431 AP001189.2-201ENST00000527320 189 ntBASIC4.59□□□□□ -1.67
SOX2P48431 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.59□□□□□ -1.67
SOX2P48431 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SOX2P48431 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SOX2P48431 AL121766.1-201ENST00000547436 487 ntBASIC4.59□□□□□ -1.67
SOX2P48431 AC079600.1-201ENST00000550326 297 ntBASIC4.59□□□□□ -1.67
SOX2P48431 AC004217.3-201ENST00000551552 878 ntBASIC4.59□□□□□ -1.67
SOX2P48431 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.59□□□□□ -1.67
SOX2P48431 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC4.59□□□□□ -1.67
SOX2P48431 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC4.59□□□□□ -1.67
SOX2P48431 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.59□□□□□ -1.67
SOX2P48431 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC4.59□□□□□ -1.67
SOX2P48431 AC067773.1-201ENST00000603284 1094 ntBASIC4.59□□□□□ -1.67
SOX2P48431 AC009597.2-201ENST00000604659 592 ntBASIC4.59□□□□□ -1.67
SOX2P48431 AL162431.4-201ENST00000604674 411 ntBASIC4.59□□□□□ -1.67
SOX2P48431 AL359091.2-201ENST00000609303 556 ntBASIC4.59□□□□□ -1.67
SOX2P48431 MIR6780B-201ENST00000610307 79 ntBASIC4.59□□□□□ -1.67
SOX2P48431 AC073114.1-201ENST00000612027 490 ntBASIC4.59□□□□□ -1.67
SOX2P48431 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC4.59□□□□□ -1.67
SOX2P48431 AC037198.3-201ENST00000616754 526 ntBASIC4.59□□□□□ -1.67
SOX2P48431 AL136981.2-201ENST00000617319 734 ntBASIC4.59□□□□□ -1.67
SOX2P48431 AC132068.1-201ENST00000623805 459 ntBASIC4.59□□□□□ -1.67
SOX2P48431 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.59□□□□□ -1.67
SOX2P48431 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SOX2P48431 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.59□□□□□ -1.68
SOX2P48431 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
SOX2P48431 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.59□□□□□ -1.68
SOX2P48431 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
SOX2P48431 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
SOX2P48431 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.59□□□□□ -1.68
SOX2P48431 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
SOX2P48431 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC4.58□□□□□ -1.68
SOX2P48431 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SOX2P48431 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SOX2P48431 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.58□□□□□ -1.68
SOX2P48431 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SOX2P48431 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms