Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
SNRPA1P09661 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC5.95□□□□□ -1.46
SNRPA1P09661 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC5.95□□□□□ -1.46
SNRPA1P09661 E2F6P2-201ENST00000420708 748 ntBASIC5.95□□□□□ -1.46
SNRPA1P09661 GAPDHP49-201ENST00000421421 961 ntBASIC5.95□□□□□ -1.46
SNRPA1P09661 AC104333.2-201ENST00000422630 192 ntBASIC5.95□□□□□ -1.46
SNRPA1P09661 RPL7AP25-201ENST00000423357 805 ntBASIC5.95□□□□□ -1.46
SNRPA1P09661 BX119904.4-201ENST00000424402 301 ntBASIC5.95□□□□□ -1.46
SNRPA1P09661 AC234779.1-201ENST00000425910 285 ntBASIC5.95□□□□□ -1.46
SNRPA1P09661 USP9YP11-201ENST00000427537 717 ntBASIC5.95□□□□□ -1.46
SNRPA1P09661 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.95□□□□□ -1.46
SNRPA1P09661 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.95□□□□□ -1.46
SNRPA1P09661 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.95□□□□□ -1.46
SNRPA1P09661 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC5.95□□□□□ -1.46
SNRPA1P09661 AC011276.1-201ENST00000469688 323 ntBASIC5.95□□□□□ -1.46
SNRPA1P09661 AC068587.1-201ENST00000483613 781 ntBASIC5.95□□□□□ -1.46
SNRPA1P09661 AC093840.1-201ENST00000511599 336 ntBASIC5.95□□□□□ -1.46
SNRPA1P09661 MAL2-205ENST00000521048 575 ntTSL 4 BASIC5.95□□□□□ -1.46
SNRPA1P09661 AP000827.1-201ENST00000527814 258 ntBASIC5.95□□□□□ -1.46
SNRPA1P09661 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.95□□□□□ -1.46
SNRPA1P09661 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
SNRPA1P09661 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC5.95□□□□□ -1.46
SNRPA1P09661 AC110760.3-201ENST00000598794 467 ntBASIC5.95□□□□□ -1.46
SNRPA1P09661 AC024060.1-201ENST00000607052 494 ntBASIC5.95□□□□□ -1.46
SNRPA1P09661 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC5.95□□□□□ -1.46
SNRPA1P09661 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
SNRPA1P09661 ZNF876P-202ENST00000398732 1485 ntBASIC5.95□□□□□ -1.46
SNRPA1P09661 AC092376.2-201ENST00000622621 4116 ntBASIC5.95□□□□□ -1.46
SNRPA1P09661 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.95□□□□□ -1.46
SNRPA1P09661 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SNRPA1P09661 CCT8P1-201ENST00000413611 1657 ntBASIC5.94□□□□□ -1.46
SNRPA1P09661 AC003985.2-201ENST00000562268 1669 ntBASIC5.94□□□□□ -1.46
SNRPA1P09661 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.94□□□□□ -1.46
SNRPA1P09661 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SNRPA1P09661 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
SNRPA1P09661 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SNRPA1P09661 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.94□□□□□ -1.46
SNRPA1P09661 OR5H2-201ENST00000355273 945 ntBASIC5.94□□□□□ -1.46
SNRPA1P09661 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
SNRPA1P09661 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SNRPA1P09661 RPL23AP59-201ENST00000399415 461 ntBASIC5.94□□□□□ -1.46
SNRPA1P09661 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SNRPA1P09661 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC5.94□□□□□ -1.46
SNRPA1P09661 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SNRPA1P09661 RPS3AP37-201ENST00000419176 745 ntBASIC5.94□□□□□ -1.46
SNRPA1P09661 PTP4A1P1-201ENST00000420539 515 ntBASIC5.94□□□□□ -1.46
SNRPA1P09661 FTLP19-201ENST00000433300 394 ntBASIC5.94□□□□□ -1.46
SNRPA1P09661 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SNRPA1P09661 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.94□□□□□ -1.46
SNRPA1P09661 AC239798.3-201ENST00000454459 408 ntBASIC5.94□□□□□ -1.46
SNRPA1P09661 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC5.94□□□□□ -1.46
SNRPA1P09661 AC010468.1-201ENST00000461022 817 ntBASIC5.94□□□□□ -1.46
SNRPA1P09661 AC083829.1-201ENST00000503756 657 ntBASIC5.94□□□□□ -1.46
SNRPA1P09661 AL356057.1-201ENST00000533798 831 ntBASIC5.94□□□□□ -1.46
SNRPA1P09661 AC087897.1-201ENST00000550134 156 ntBASIC5.94□□□□□ -1.46
SNRPA1P09661 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SNRPA1P09661 DUXAP6-201ENST00000553858 601 ntBASIC5.94□□□□□ -1.46
SNRPA1P09661 AC087477.6-201ENST00000559595 843 ntBASIC5.94□□□□□ -1.46
SNRPA1P09661 ATP5J2P6-201ENST00000565203 266 ntBASIC5.94□□□□□ -1.46
SNRPA1P09661 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SNRPA1P09661 PIGPP4-201ENST00000584447 307 ntBASIC5.94□□□□□ -1.46
SNRPA1P09661 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC5.94□□□□□ -1.46
SNRPA1P09661 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SNRPA1P09661 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.94□□□□□ -1.46
SNRPA1P09661 AP002782.1-201ENST00000623107 614 ntBASIC5.94□□□□□ -1.46
SNRPA1P09661 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.94□□□□□ -1.46
SNRPA1P09661 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC5.94□□□□□ -1.46
SNRPA1P09661 MIR3974-201ENST00000637126 96 ntBASIC5.94□□□□□ -1.46
SNRPA1P09661 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
SNRPA1P09661 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
SNRPA1P09661 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
SNRPA1P09661 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.94□□□□□ -1.46
SNRPA1P09661 AC104623.2-202ENST00000623477 4002 ntBASIC5.94□□□□□ -1.46
SNRPA1P09661 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SNRPA1P09661 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SNRPA1P09661 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
SNRPA1P09661 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
SNRPA1P09661 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
SNRPA1P09661 AC135352.1-201ENST00000506173 1418 ntBASIC5.93□□□□□ -1.46
SNRPA1P09661 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SNRPA1P09661 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.93□□□□□ -1.46
SNRPA1P09661 AC008549.2-201ENST00000333482 706 ntBASIC5.93□□□□□ -1.46
SNRPA1P09661 RNA5SP509-201ENST00000364577 119 ntBASIC5.93□□□□□ -1.46
SNRPA1P09661 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
SNRPA1P09661 SDHCP2-201ENST00000398565 501 ntBASIC5.93□□□□□ -1.46
SNRPA1P09661 LUZP4P1-201ENST00000415420 344 ntBASIC5.93□□□□□ -1.46
SNRPA1P09661 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.93□□□□□ -1.46
SNRPA1P09661 HMGB1P49-201ENST00000418882 569 ntBASIC5.93□□□□□ -1.46
SNRPA1P09661 EIF4A1P1-201ENST00000420241 934 ntBASIC5.93□□□□□ -1.46
SNRPA1P09661 AL356387.2-201ENST00000422272 243 ntBASIC5.93□□□□□ -1.46
SNRPA1P09661 AC005189.1-201ENST00000431286 310 ntBASIC5.93□□□□□ -1.46
SNRPA1P09661 AC004938.1-201ENST00000438468 308 ntBASIC5.93□□□□□ -1.46
SNRPA1P09661 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC5.93□□□□□ -1.46
SNRPA1P09661 BTF3P6-201ENST00000448054 499 ntBASIC5.93□□□□□ -1.46
SNRPA1P09661 RPL5P13-201ENST00000462840 709 ntBASIC5.93□□□□□ -1.46
SNRPA1P09661 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SNRPA1P09661 BET1P1-201ENST00000482276 359 ntBASIC5.93□□□□□ -1.46
SNRPA1P09661 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.93□□□□□ -1.46
SNRPA1P09661 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC5.93□□□□□ -1.46
SNRPA1P09661 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms