Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 RGS17P1-201ENST00000423358 553 ntBASIC5.28□□□□□ -1.56
HDAC6Q9UBN7 AC093422.3-201ENST00000428506 305 ntBASIC5.28□□□□□ -1.56
HDAC6Q9UBN7 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.28□□□□□ -1.56
HDAC6Q9UBN7 RPS7P2-201ENST00000435134 607 ntBASIC5.28□□□□□ -1.56
HDAC6Q9UBN7 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC5.28□□□□□ -1.56
HDAC6Q9UBN7 TRIM60P9Y-201ENST00000438459 816 ntBASIC5.28□□□□□ -1.56
HDAC6Q9UBN7 ARF4P4-201ENST00000439608 520 ntBASIC5.28□□□□□ -1.56
HDAC6Q9UBN7 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC5.28□□□□□ -1.56
HDAC6Q9UBN7 TRIM60P11Y-201ENST00000445313 801 ntBASIC5.28□□□□□ -1.56
HDAC6Q9UBN7 NDUFAF4P3-201ENST00000456468 525 ntBASIC5.28□□□□□ -1.56
HDAC6Q9UBN7 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.28□□□□□ -1.56
HDAC6Q9UBN7 CDH12P2-201ENST00000504393 298 ntBASIC5.28□□□□□ -1.56
HDAC6Q9UBN7 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.28□□□□□ -1.56
HDAC6Q9UBN7 RNU6-709P-201ENST00000517257 104 ntBASIC5.28□□□□□ -1.56
HDAC6Q9UBN7 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.28□□□□□ -1.56
HDAC6Q9UBN7 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC5.28□□□□□ -1.56
HDAC6Q9UBN7 AL109741.3-201ENST00000561748 592 ntBASIC5.28□□□□□ -1.56
HDAC6Q9UBN7 AC122134.1-201ENST00000565664 1104 ntBASIC5.28□□□□□ -1.56
HDAC6Q9UBN7 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC5.28□□□□□ -1.56
HDAC6Q9UBN7 AC091057.3-201ENST00000602684 733 ntBASIC5.28□□□□□ -1.56
HDAC6Q9UBN7 AC023762.1-201ENST00000603280 584 ntBASIC5.28□□□□□ -1.56
HDAC6Q9UBN7 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.28□□□□□ -1.56
HDAC6Q9UBN7 VN1R9P-201ENST00000614184 867 ntBASIC5.28□□□□□ -1.56
HDAC6Q9UBN7 AC006338.2-201ENST00000616864 791 ntBASIC5.28□□□□□ -1.56
HDAC6Q9UBN7 AL590396.4-201ENST00000636779 956 ntBASIC5.28□□□□□ -1.56
HDAC6Q9UBN7 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.28□□□□□ -1.56
HDAC6Q9UBN7 CASC19-206ENST00000641028 1430 ntBASIC5.28□□□□□ -1.56
HDAC6Q9UBN7 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
HDAC6Q9UBN7 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HDAC6Q9UBN7 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.28□□□□□ -1.56
HDAC6Q9UBN7 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HDAC6Q9UBN7 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
HDAC6Q9UBN7 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
HDAC6Q9UBN7 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.27□□□□□ -1.57
HDAC6Q9UBN7 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HDAC6Q9UBN7 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HDAC6Q9UBN7 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HDAC6Q9UBN7 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
HDAC6Q9UBN7 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
HDAC6Q9UBN7 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
HDAC6Q9UBN7 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
HDAC6Q9UBN7 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.27□□□□□ -1.57
HDAC6Q9UBN7 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
HDAC6Q9UBN7 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.27□□□□□ -1.57
HDAC6Q9UBN7 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC5.27□□□□□ -1.57
HDAC6Q9UBN7 AC140479.3-201ENST00000418944 1126 ntBASIC5.27□□□□□ -1.57
HDAC6Q9UBN7 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.27□□□□□ -1.57
HDAC6Q9UBN7 AC005189.1-201ENST00000431286 310 ntBASIC5.27□□□□□ -1.57
HDAC6Q9UBN7 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.27□□□□□ -1.57
HDAC6Q9UBN7 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.27□□□□□ -1.57
HDAC6Q9UBN7 AC097499.1-201ENST00000444277 208 ntBASIC5.27□□□□□ -1.57
HDAC6Q9UBN7 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC5.27□□□□□ -1.57
HDAC6Q9UBN7 RPL34P26-201ENST00000445636 354 ntBASIC5.27□□□□□ -1.57
HDAC6Q9UBN7 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HDAC6Q9UBN7 RPL10P17-201ENST00000453852 316 ntBASIC5.27□□□□□ -1.57
HDAC6Q9UBN7 DUXAP8-207ENST00000456786 622 ntBASIC5.27□□□□□ -1.57
HDAC6Q9UBN7 RN7SL517P-201ENST00000462240 305 ntBASIC5.27□□□□□ -1.57
HDAC6Q9UBN7 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HDAC6Q9UBN7 AC083829.1-201ENST00000503756 657 ntBASIC5.27□□□□□ -1.57
HDAC6Q9UBN7 PRELID3BP6-201ENST00000503839 571 ntBASIC5.27□□□□□ -1.57
HDAC6Q9UBN7 AC069306.1-201ENST00000507006 843 ntBASIC5.27□□□□□ -1.57
HDAC6Q9UBN7 RN7SKP46-201ENST00000515942 234 ntBASIC5.27□□□□□ -1.57
HDAC6Q9UBN7 Y_RNA.719-201ENST00000517156 106 ntBASIC5.27□□□□□ -1.57
HDAC6Q9UBN7 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC5.27□□□□□ -1.57
HDAC6Q9UBN7 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC5.27□□□□□ -1.57
HDAC6Q9UBN7 AL121594.4-201ENST00000556211 1196 ntBASIC5.27□□□□□ -1.57
HDAC6Q9UBN7 AC087477.6-201ENST00000559595 843 ntBASIC5.27□□□□□ -1.57
HDAC6Q9UBN7 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC5.27□□□□□ -1.57
HDAC6Q9UBN7 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.27□□□□□ -1.57
HDAC6Q9UBN7 AP000919.1-202ENST00000581139 1264 ntBASIC5.27□□□□□ -1.57
HDAC6Q9UBN7 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.27□□□□□ -1.57
HDAC6Q9UBN7 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.27□□□□□ -1.57
HDAC6Q9UBN7 DUXAP10-204ENST00000612052 616 ntBASIC5.27□□□□□ -1.57
HDAC6Q9UBN7 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.27□□□□□ -1.57
HDAC6Q9UBN7 AC011472.4-201ENST00000615848 491 ntBASIC5.27□□□□□ -1.57
HDAC6Q9UBN7 MLECP1-201ENST00000615893 709 ntBASIC5.27□□□□□ -1.57
HDAC6Q9UBN7 AL512427.1-201ENST00000618593 349 ntBASIC5.27□□□□□ -1.57
HDAC6Q9UBN7 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.27□□□□□ -1.57
HDAC6Q9UBN7 MIR6830-201ENST00000636015 70 ntBASIC5.27□□□□□ -1.57
HDAC6Q9UBN7 OR52H1-202ENST00000641796 1061 ntBASIC5.27□□□□□ -1.57
HDAC6Q9UBN7 VPS35P1-201ENST00000563400 1518 ntBASIC5.27□□□□□ -1.57
HDAC6Q9UBN7 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.27□□□□□ -1.57
HDAC6Q9UBN7 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
HDAC6Q9UBN7 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HDAC6Q9UBN7 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.27□□□□□ -1.57
HDAC6Q9UBN7 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
HDAC6Q9UBN7 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.26□□□□□ -1.57
HDAC6Q9UBN7 AC108751.5-201ENST00000492880 1336 ntBASIC5.26□□□□□ -1.57
HDAC6Q9UBN7 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HDAC6Q9UBN7 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
HDAC6Q9UBN7 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
HDAC6Q9UBN7 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HDAC6Q9UBN7 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HDAC6Q9UBN7 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
HDAC6Q9UBN7 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.26□□□□□ -1.57
HDAC6Q9UBN7 RNU6-666P-201ENST00000363499 107 ntBASIC5.26□□□□□ -1.57
HDAC6Q9UBN7 RNU5E-10P-201ENST00000363506 118 ntBASIC5.26□□□□□ -1.57
HDAC6Q9UBN7 RNU5B-4P-201ENST00000363508 111 ntBASIC5.26□□□□□ -1.57
HDAC6Q9UBN7 AP000357.1-201ENST00000409926 1165 ntBASIC5.26□□□□□ -1.57
HDAC6Q9UBN7 RNU4-25P-201ENST00000410569 230 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms