Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
CNTNAP3Q9BZ76 LOXHD1-201ENST00000300591 3970 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CNTNAP3Q9BZ76 TRIM42-201ENST00000286349 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CNTNAP3Q9BZ76 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CNTNAP3Q9BZ76 OR4F15-201ENST00000332238 2119 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
CNTNAP3Q9BZ76 SLC39A12-204ENST00000539911 2461 ntTSL 2 BASIC6.59□□□□□ -1.35
CNTNAP3Q9BZ76 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC6.59□□□□□ -1.35
CNTNAP3Q9BZ76 TLR3-202ENST00000504367 2310 ntTSL 2 BASIC6.59□□□□□ -1.35
CNTNAP3Q9BZ76 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC6.59□□□□□ -1.35
CNTNAP3Q9BZ76 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CNTNAP3Q9BZ76 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.59□□□□□ -1.35
CNTNAP3Q9BZ76 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
CNTNAP3Q9BZ76 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CNTNAP3Q9BZ76 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC6.59□□□□□ -1.35
CNTNAP3Q9BZ76 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CNTNAP3Q9BZ76 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CNTNAP3Q9BZ76 BEST3-205ENST00000488961 2878 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CNTNAP3Q9BZ76 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CNTNAP3Q9BZ76 RNU6-1115P-201ENST00000362490 106 ntBASIC6.59□□□□□ -1.35
CNTNAP3Q9BZ76 RNU6-582P-201ENST00000362989 107 ntBASIC6.59□□□□□ -1.35
CNTNAP3Q9BZ76 RNU4-2-201ENST00000365668 141 ntBASIC6.59□□□□□ -1.35
CNTNAP3Q9BZ76 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CNTNAP3Q9BZ76 CUBN-201ENST00000377823 705 ntTSL 3 BASIC6.59□□□□□ -1.35
CNTNAP3Q9BZ76 Y_RNA.455-201ENST00000384230 98 ntBASIC6.59□□□□□ -1.35
CNTNAP3Q9BZ76 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC6.59□□□□□ -1.35
CNTNAP3Q9BZ76 AL391361.1-201ENST00000405580 489 ntBASIC6.59□□□□□ -1.35
CNTNAP3Q9BZ76 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC6.59□□□□□ -1.35
CNTNAP3Q9BZ76 GEMIN2P2-201ENST00000418195 715 ntBASIC6.59□□□□□ -1.35
CNTNAP3Q9BZ76 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.59□□□□□ -1.35
CNTNAP3Q9BZ76 MYL6P3-201ENST00000436904 432 ntBASIC6.59□□□□□ -1.35
CNTNAP3Q9BZ76 AC005040.1-201ENST00000437783 482 ntBASIC6.59□□□□□ -1.35
CNTNAP3Q9BZ76 AC114755.4-201ENST00000439114 443 ntBASIC6.59□□□□□ -1.35
CNTNAP3Q9BZ76 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC6.59□□□□□ -1.35
CNTNAP3Q9BZ76 PCMTD1P1-201ENST00000455560 355 ntBASIC6.59□□□□□ -1.35
CNTNAP3Q9BZ76 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC6.59□□□□□ -1.35
CNTNAP3Q9BZ76 MTCO1P42-201ENST00000457379 726 ntBASIC6.59□□□□□ -1.35
CNTNAP3Q9BZ76 AC023141.9-201ENST00000458734 412 ntBASIC6.59□□□□□ -1.35
CNTNAP3Q9BZ76 AC233702.1-201ENST00000482905 502 ntBASIC6.59□□□□□ -1.35
CNTNAP3Q9BZ76 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC6.59□□□□□ -1.35
CNTNAP3Q9BZ76 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC6.59□□□□□ -1.35
CNTNAP3Q9BZ76 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.59□□□□□ -1.35
CNTNAP3Q9BZ76 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC6.59□□□□□ -1.35
CNTNAP3Q9BZ76 AC022861.1-201ENST00000522981 663 ntBASIC6.59□□□□□ -1.35
CNTNAP3Q9BZ76 OR5D2P-201ENST00000524390 911 ntBASIC6.59□□□□□ -1.35
CNTNAP3Q9BZ76 AC008126.1-201ENST00000549019 480 ntBASIC6.59□□□□□ -1.35
CNTNAP3Q9BZ76 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.59□□□□□ -1.35
CNTNAP3Q9BZ76 TRAV15-201ENST00000556680 249 ntBASIC6.59□□□□□ -1.35
CNTNAP3Q9BZ76 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC6.59□□□□□ -1.35
CNTNAP3Q9BZ76 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC6.59□□□□□ -1.35
CNTNAP3Q9BZ76 AC004805.2-201ENST00000605382 482 ntBASIC6.59□□□□□ -1.35
CNTNAP3Q9BZ76 AC020634.1-201ENST00000608701 549 ntBASIC6.59□□□□□ -1.35
CNTNAP3Q9BZ76 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC6.59□□□□□ -1.35
CNTNAP3Q9BZ76 AC007485.1-201ENST00000616755 206 ntBASIC6.59□□□□□ -1.35
CNTNAP3Q9BZ76 AC005899.7-201ENST00000618199 588 ntBASIC6.59□□□□□ -1.35
CNTNAP3Q9BZ76 uc_338.11-201ENST00000619132 160 ntBASIC6.59□□□□□ -1.35
CNTNAP3Q9BZ76 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC6.59□□□□□ -1.35
CNTNAP3Q9BZ76 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
CNTNAP3Q9BZ76 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CNTNAP3Q9BZ76 RMST-210ENST00000640149 2844 ntTSL 5 BASIC6.59□□□□□ -1.35
CNTNAP3Q9BZ76 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CNTNAP3Q9BZ76 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CNTNAP3Q9BZ76 AC006116.1-201ENST00000587908 2171 ntBASIC6.59□□□□□ -1.35
CNTNAP3Q9BZ76 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
CNTNAP3Q9BZ76 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC6.59□□□□□ -1.35
CNTNAP3Q9BZ76 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CNTNAP3Q9BZ76 SAMMSON-213ENST00000641336 1521 ntBASIC6.59□□□□□ -1.35
CNTNAP3Q9BZ76 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
CNTNAP3Q9BZ76 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.59□□□□□ -1.35
CNTNAP3Q9BZ76 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC6.59□□□□□ -1.35
CNTNAP3Q9BZ76 ZNF585B-204ENST00000531805 2971 ntTSL 2 BASIC6.59□□□□□ -1.35
CNTNAP3Q9BZ76 MMP25-AS1-206ENST00000573130 4434 ntTSL 2 BASIC6.59□□□□□ -1.36
CNTNAP3Q9BZ76 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
CNTNAP3Q9BZ76 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
CNTNAP3Q9BZ76 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
CNTNAP3Q9BZ76 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.36
CNTNAP3Q9BZ76 TYW1B-203ENST00000620995 3113 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
CNTNAP3Q9BZ76 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.58□□□□□ -1.36
CNTNAP3Q9BZ76 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CNTNAP3Q9BZ76 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC6.58□□□□□ -1.36
CNTNAP3Q9BZ76 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
CNTNAP3Q9BZ76 DAZ3-201ENST00000315357 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
CNTNAP3Q9BZ76 DAZ2-201ENST00000382294 3277 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
CNTNAP3Q9BZ76 DAZ4-204ENST00000415508 3277 ntTSL 5 BASIC6.58□□□□□ -1.36
CNTNAP3Q9BZ76 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC6.58□□□□□ -1.36
CNTNAP3Q9BZ76 LINC01829-202ENST00000433133 2100 ntTSL 2 BASIC6.58□□□□□ -1.36
CNTNAP3Q9BZ76 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CNTNAP3Q9BZ76 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CNTNAP3Q9BZ76 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CNTNAP3Q9BZ76 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CNTNAP3Q9BZ76 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CNTNAP3Q9BZ76 Y_RNA.100-201ENST00000363141 102 ntBASIC6.58□□□□□ -1.36
CNTNAP3Q9BZ76 Y_RNA.180-201ENST00000363867 113 ntBASIC6.58□□□□□ -1.36
CNTNAP3Q9BZ76 MIR320B1-201ENST00000390209 79 ntBASIC6.58□□□□□ -1.36
CNTNAP3Q9BZ76 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
CNTNAP3Q9BZ76 RNU6-1109P-201ENST00000391187 107 ntBASIC6.58□□□□□ -1.36
CNTNAP3Q9BZ76 CD3D-202ENST00000392884 476 ntTSL 2 BASIC6.58□□□□□ -1.36
CNTNAP3Q9BZ76 MRPS21P5-201ENST00000417885 231 ntBASIC6.58□□□□□ -1.36
CNTNAP3Q9BZ76 AC139712.2-201ENST00000424302 339 ntBASIC6.58□□□□□ -1.36
CNTNAP3Q9BZ76 DAZAP2-202ENST00000425012 1117 ntTSL 2 BASIC6.58□□□□□ -1.36
CNTNAP3Q9BZ76 PNKDP1-201ENST00000435914 430 ntBASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms