Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC7.5□□□□□ -1.21
LRCH3Q96II8 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC7.5□□□□□ -1.21
LRCH3Q96II8 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
LRCH3Q96II8 ARPP21-207ENST00000417925 3086 ntTSL 2 BASIC7.5□□□□□ -1.21
LRCH3Q96II8 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
LRCH3Q96II8 MMP25-AS1-206ENST00000573130 4434 ntTSL 2 BASIC7.5□□□□□ -1.21
LRCH3Q96II8 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC7.5□□□□□ -1.21
LRCH3Q96II8 Y_RNA.167-201ENST00000363735 109 ntBASIC7.5□□□□□ -1.21
LRCH3Q96II8 SNORD113-1-201ENST00000365321 69 ntBASIC7.5□□□□□ -1.21
LRCH3Q96II8 Y_RNA.367-201ENST00000365544 101 ntBASIC7.5□□□□□ -1.21
LRCH3Q96II8 Y_RNA.785-201ENST00000384290 109 ntBASIC7.5□□□□□ -1.21
LRCH3Q96II8 Y_RNA.477-201ENST00000384352 108 ntBASIC7.5□□□□□ -1.21
LRCH3Q96II8 RNU6-713P-201ENST00000384761 107 ntBASIC7.5□□□□□ -1.21
LRCH3Q96II8 RNU6-823P-201ENST00000391042 103 ntBASIC7.5□□□□□ -1.21
LRCH3Q96II8 NDUFS5P1-201ENST00000405668 289 ntBASIC7.5□□□□□ -1.21
LRCH3Q96II8 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC7.5□□□□□ -1.21
LRCH3Q96II8 ARL5AP1-201ENST00000418991 388 ntBASIC7.5□□□□□ -1.21
LRCH3Q96II8 AL593856.1-201ENST00000419949 805 ntBASIC7.5□□□□□ -1.21
LRCH3Q96II8 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
LRCH3Q96II8 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC7.5□□□□□ -1.21
LRCH3Q96II8 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC7.5□□□□□ -1.21
LRCH3Q96II8 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC7.5□□□□□ -1.21
LRCH3Q96II8 COL11A2P1-205ENST00000441798 676 ntBASIC7.5□□□□□ -1.21
LRCH3Q96II8 ANAPC5-204ENST00000441917 2147 ntTSL 5 BASIC7.5□□□□□ -1.21
LRCH3Q96II8 AC011742.2-201ENST00000443818 352 ntBASIC7.5□□□□□ -1.21
LRCH3Q96II8 MTND1P17-201ENST00000448961 204 ntBASIC7.5□□□□□ -1.21
LRCH3Q96II8 VPS25P1-201ENST00000455691 508 ntBASIC7.5□□□□□ -1.21
LRCH3Q96II8 AP1S2P1-201ENST00000457344 379 ntBASIC7.5□□□□□ -1.21
LRCH3Q96II8 RN7SL254P-201ENST00000460609 284 ntBASIC7.5□□□□□ -1.21
LRCH3Q96II8 RN7SL515P-201ENST00000463999 297 ntBASIC7.5□□□□□ -1.21
LRCH3Q96II8 RN7SL860P-201ENST00000473738 223 ntBASIC7.5□□□□□ -1.21
LRCH3Q96II8 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC7.5□□□□□ -1.21
LRCH3Q96II8 RPL7P43-201ENST00000478876 753 ntBASIC7.5□□□□□ -1.21
LRCH3Q96II8 ALDH7A1P3-201ENST00000492517 345 ntBASIC7.5□□□□□ -1.21
LRCH3Q96II8 AC026784.1-201ENST00000507986 352 ntBASIC7.5□□□□□ -1.21
LRCH3Q96II8 RNU6-1038P-201ENST00000516516 104 ntBASIC7.5□□□□□ -1.21
LRCH3Q96II8 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC7.5□□□□□ -1.21
LRCH3Q96II8 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC7.5□□□□□ -1.21
LRCH3Q96II8 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC7.5□□□□□ -1.21
LRCH3Q96II8 HAUS8P1-201ENST00000549005 542 ntBASIC7.5□□□□□ -1.21
LRCH3Q96II8 AC090502.2-201ENST00000549267 280 ntBASIC7.5□□□□□ -1.21
LRCH3Q96II8 FAM106CP-201ENST00000582212 507 ntBASIC7.5□□□□□ -1.21
LRCH3Q96II8 MIR4424-201ENST00000585257 86 ntBASIC7.5□□□□□ -1.21
LRCH3Q96II8 AC125232.2-201ENST00000592457 143 ntBASIC7.5□□□□□ -1.21
LRCH3Q96II8 AC145207.9-201ENST00000623802 325 ntBASIC7.5□□□□□ -1.21
LRCH3Q96II8 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC7.5□□□□□ -1.21
LRCH3Q96II8 IGSF11-201ENST00000354673 3206 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
LRCH3Q96II8 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC7.5□□□□□ -1.21
LRCH3Q96II8 HKR1-223ENST00000591471 3472 ntTSL 2 BASIC7.5□□□□□ -1.21
LRCH3Q96II8 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
LRCH3Q96II8 ZNF844-202ENST00000441304 2036 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
LRCH3Q96II8 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
LRCH3Q96II8 ADH7-201ENST00000209665 2289 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
LRCH3Q96II8 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
LRCH3Q96II8 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
LRCH3Q96II8 LINC02535-201ENST00000455071 2513 ntTSL 2 BASIC7.5□□□□□ -1.21
LRCH3Q96II8 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC7.5□□□□□ -1.21
LRCH3Q96II8 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
LRCH3Q96II8 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC7.5□□□□□ -1.21
LRCH3Q96II8 RAB11A-201ENST00000261890 4930 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
LRCH3Q96II8 BMPR1APS1-201ENST00000403332 1598 ntBASIC7.5□□□□□ -1.21
LRCH3Q96II8 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
LRCH3Q96II8 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
LRCH3Q96II8 CDY19P-201ENST00000411668 1613 ntBASIC7.49□□□□□ -1.21
LRCH3Q96II8 CDY18P-201ENST00000438294 1609 ntBASIC7.49□□□□□ -1.21
LRCH3Q96II8 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC7.49□□□□□ -1.21
LRCH3Q96II8 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
LRCH3Q96II8 AC010886.1-201ENST00000437380 2869 ntBASIC7.49□□□□□ -1.21
LRCH3Q96II8 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
LRCH3Q96II8 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC7.49□□□□□ -1.21
LRCH3Q96II8 COX6B1P3-201ENST00000312310 260 ntBASIC7.49□□□□□ -1.21
LRCH3Q96II8 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
LRCH3Q96II8 RNU6-552P-201ENST00000362869 119 ntBASIC7.49□□□□□ -1.21
LRCH3Q96II8 Y_RNA.150-201ENST00000363562 102 ntBASIC7.49□□□□□ -1.21
LRCH3Q96II8 RNU6-952P-201ENST00000391164 108 ntBASIC7.49□□□□□ -1.21
LRCH3Q96II8 HMGB1P17-201ENST00000403495 628 ntBASIC7.49□□□□□ -1.21
LRCH3Q96II8 RNU2-36P-201ENST00000410361 191 ntBASIC7.49□□□□□ -1.21
LRCH3Q96II8 RNU2-28P-201ENST00000410457 189 ntBASIC7.49□□□□□ -1.21
LRCH3Q96II8 RNU2-38P-201ENST00000410856 79 ntBASIC7.49□□□□□ -1.21
LRCH3Q96II8 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC7.49□□□□□ -1.21
LRCH3Q96II8 RPS15AP12-201ENST00000419498 388 ntBASIC7.49□□□□□ -1.21
LRCH3Q96II8 AL590135.1-201ENST00000422215 156 ntBASIC7.49□□□□□ -1.21
LRCH3Q96II8 COX6CP15-201ENST00000426313 211 ntBASIC7.49□□□□□ -1.21
LRCH3Q96II8 RPSAP65-201ENST00000429660 595 ntBASIC7.49□□□□□ -1.21
LRCH3Q96II8 RPL23AP19-201ENST00000436229 369 ntBASIC7.49□□□□□ -1.21
LRCH3Q96II8 AL935212.3-201ENST00000450729 284 ntBASIC7.49□□□□□ -1.21
LRCH3Q96II8 RPL23AP11-201ENST00000475260 469 ntBASIC7.49□□□□□ -1.21
LRCH3Q96II8 RPL23AP8-201ENST00000479812 475 ntBASIC7.49□□□□□ -1.21
LRCH3Q96II8 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC7.49□□□□□ -1.21
LRCH3Q96II8 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC7.49□□□□□ -1.21
LRCH3Q96II8 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
LRCH3Q96II8 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC7.49□□□□□ -1.21
LRCH3Q96II8 RNA5SP337-201ENST00000517007 109 ntBASIC7.49□□□□□ -1.21
LRCH3Q96II8 AC131281.1-201ENST00000522984 164 ntBASIC7.49□□□□□ -1.21
LRCH3Q96II8 AP005435.4-201ENST00000529514 284 ntBASIC7.49□□□□□ -1.21
LRCH3Q96II8 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC7.49□□□□□ -1.21
LRCH3Q96II8 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC7.49□□□□□ -1.21
LRCH3Q96II8 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC7.49□□□□□ -1.21
LRCH3Q96II8 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC7.49□□□□□ -1.21
LRCH3Q96II8 AP002800.1-201ENST00000624982 2225 ntBASIC7.49□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms