Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
SYNPOQ8N3V7 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SYNPOQ8N3V7 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.78□□□□□ -1.48
SYNPOQ8N3V7 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC5.78□□□□□ -1.48
SYNPOQ8N3V7 AL049779.3-201ENST00000557141 606 ntBASIC5.78□□□□□ -1.48
SYNPOQ8N3V7 ANKRD36BP2-206ENST00000575193 1245 ntBASIC5.78□□□□□ -1.48
SYNPOQ8N3V7 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.78□□□□□ -1.48
SYNPOQ8N3V7 AC107982.3-201ENST00000584957 985 ntBASIC5.78□□□□□ -1.48
SYNPOQ8N3V7 RSL24D1P11-201ENST00000591045 491 ntBASIC5.78□□□□□ -1.48
SYNPOQ8N3V7 AC022146.1-201ENST00000595307 847 ntBASIC5.78□□□□□ -1.48
SYNPOQ8N3V7 AC025165.5-201ENST00000602802 578 ntBASIC5.78□□□□□ -1.48
SYNPOQ8N3V7 BNIP3P11-201ENST00000603878 563 ntBASIC5.78□□□□□ -1.48
SYNPOQ8N3V7 AC128687.1-201ENST00000605304 619 ntBASIC5.78□□□□□ -1.48
SYNPOQ8N3V7 AL031775.1-201ENST00000607014 887 ntBASIC5.78□□□□□ -1.48
SYNPOQ8N3V7 AC024560.3-201ENST00000608482 349 ntBASIC5.78□□□□□ -1.48
SYNPOQ8N3V7 AC123768.4-201ENST00000616244 701 ntBASIC5.78□□□□□ -1.48
SYNPOQ8N3V7 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.78□□□□□ -1.48
SYNPOQ8N3V7 AC090582.1-201ENST00000636321 199 ntBASIC5.78□□□□□ -1.48
SYNPOQ8N3V7 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
SYNPOQ8N3V7 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.78□□□□□ -1.48
SYNPOQ8N3V7 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
SYNPOQ8N3V7 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.78□□□□□ -1.48
SYNPOQ8N3V7 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
SYNPOQ8N3V7 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SYNPOQ8N3V7 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC5.78□□□□□ -1.48
SYNPOQ8N3V7 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC5.78□□□□□ -1.48
SYNPOQ8N3V7 AL731532.1-201ENST00000623972 4236 ntBASIC5.78□□□□□ -1.48
SYNPOQ8N3V7 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.78□□□□□ -1.48
SYNPOQ8N3V7 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.77□□□□□ -1.49
SYNPOQ8N3V7 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
SYNPOQ8N3V7 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SYNPOQ8N3V7 AL672167.1-206ENST00000356293 943 ntBASIC5.77□□□□□ -1.49
SYNPOQ8N3V7 U3.4-201ENST00000363352 213 ntBASIC5.77□□□□□ -1.49
SYNPOQ8N3V7 RNA5SP30-201ENST00000365552 115 ntBASIC5.77□□□□□ -1.49
SYNPOQ8N3V7 RNU6-441P-201ENST00000384545 106 ntBASIC5.77□□□□□ -1.49
SYNPOQ8N3V7 MIR506-201ENST00000384998 124 ntBASIC5.77□□□□□ -1.49
SYNPOQ8N3V7 AC005042.1-201ENST00000393397 800 ntBASIC5.77□□□□□ -1.49
SYNPOQ8N3V7 VDAC2P1-201ENST00000399358 958 ntBASIC5.77□□□□□ -1.49
SYNPOQ8N3V7 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.77□□□□□ -1.49
SYNPOQ8N3V7 TMBIM7P-201ENST00000418074 855 ntBASIC5.77□□□□□ -1.49
SYNPOQ8N3V7 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.77□□□□□ -1.49
SYNPOQ8N3V7 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
SYNPOQ8N3V7 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SYNPOQ8N3V7 SDCBPP2-201ENST00000424643 885 ntBASIC5.77□□□□□ -1.49
SYNPOQ8N3V7 AC073335.1-201ENST00000427776 363 ntBASIC5.77□□□□□ -1.49
SYNPOQ8N3V7 USP24P1-201ENST00000433802 779 ntBASIC5.77□□□□□ -1.49
SYNPOQ8N3V7 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC5.77□□□□□ -1.49
SYNPOQ8N3V7 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC5.77□□□□□ -1.49
SYNPOQ8N3V7 AC019185.1-201ENST00000442718 389 ntBASIC5.77□□□□□ -1.49
SYNPOQ8N3V7 CEACAMP7-201ENST00000444105 496 ntBASIC5.77□□□□□ -1.49
SYNPOQ8N3V7 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.77□□□□□ -1.49
SYNPOQ8N3V7 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC5.77□□□□□ -1.49
SYNPOQ8N3V7 AC002553.2-201ENST00000453217 340 ntBASIC5.77□□□□□ -1.49
SYNPOQ8N3V7 AC072052.1-201ENST00000496556 306 ntBASIC5.77□□□□□ -1.49
SYNPOQ8N3V7 MTATP6P22-201ENST00000507369 598 ntBASIC5.77□□□□□ -1.49
SYNPOQ8N3V7 PGAM1P13-201ENST00000507497 754 ntBASIC5.77□□□□□ -1.49
SYNPOQ8N3V7 CDH12P4-201ENST00000517835 295 ntBASIC5.77□□□□□ -1.49
SYNPOQ8N3V7 CDH12P3-201ENST00000517935 295 ntBASIC5.77□□□□□ -1.49
SYNPOQ8N3V7 CDH12P1-201ENST00000518435 295 ntBASIC5.77□□□□□ -1.49
SYNPOQ8N3V7 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC5.77□□□□□ -1.49
SYNPOQ8N3V7 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
SYNPOQ8N3V7 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC5.77□□□□□ -1.49
SYNPOQ8N3V7 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.77□□□□□ -1.49
SYNPOQ8N3V7 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.77□□□□□ -1.49
SYNPOQ8N3V7 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC5.77□□□□□ -1.49
SYNPOQ8N3V7 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC5.77□□□□□ -1.49
SYNPOQ8N3V7 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC5.77□□□□□ -1.49
SYNPOQ8N3V7 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
SYNPOQ8N3V7 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
SYNPOQ8N3V7 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC5.77□□□□□ -1.49
SYNPOQ8N3V7 AC064872.1-201ENST00000604823 1072 ntBASIC5.77□□□□□ -1.49
SYNPOQ8N3V7 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SYNPOQ8N3V7 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.77□□□□□ -1.49
SYNPOQ8N3V7 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.77□□□□□ -1.49
SYNPOQ8N3V7 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SYNPOQ8N3V7 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
SYNPOQ8N3V7 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SYNPOQ8N3V7 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
SYNPOQ8N3V7 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
SYNPOQ8N3V7 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
SYNPOQ8N3V7 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
SYNPOQ8N3V7 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.77□□□□□ -1.49
SYNPOQ8N3V7 AP002512.4-202ENST00000641599 4530 ntBASIC5.76□□□□□ -1.49
SYNPOQ8N3V7 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
SYNPOQ8N3V7 DNM1P47-203ENST00000571780 12667 ntBASIC5.76□□□□□ -1.49
SYNPOQ8N3V7 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.76□□□□□ -1.49
SYNPOQ8N3V7 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SYNPOQ8N3V7 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.76□□□□□ -1.49
SYNPOQ8N3V7 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SYNPOQ8N3V7 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SYNPOQ8N3V7 AC092070.2-203ENST00000598377 3644 ntBASIC5.76□□□□□ -1.49
SYNPOQ8N3V7 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SYNPOQ8N3V7 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.76□□□□□ -1.49
SYNPOQ8N3V7 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SYNPOQ8N3V7 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
SYNPOQ8N3V7 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SYNPOQ8N3V7 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
SYNPOQ8N3V7 RNU6-1293P-201ENST00000384077 107 ntBASIC5.76□□□□□ -1.49
SYNPOQ8N3V7 RNU6-921P-201ENST00000384361 107 ntBASIC5.76□□□□□ -1.49
SYNPOQ8N3V7 RNU1-149P-201ENST00000390870 161 ntBASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms