Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC5.49□□□□□ -1.53
POLR2AP24928 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
POLR2AP24928 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
POLR2AP24928 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
POLR2AP24928 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
POLR2AP24928 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
POLR2AP24928 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
POLR2AP24928 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
POLR2AP24928 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
POLR2AP24928 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
POLR2AP24928 SCARNA15-201ENST00000607520 4325 ntBASIC5.49□□□□□ -1.53
POLR2AP24928 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.49□□□□□ -1.53
POLR2AP24928 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
POLR2AP24928 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
POLR2AP24928 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC5.49□□□□□ -1.53
POLR2AP24928 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
POLR2AP24928 TAF9BP2-201ENST00000400856 499 ntBASIC5.49□□□□□ -1.53
POLR2AP24928 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
POLR2AP24928 AC096533.1-201ENST00000411645 353 ntBASIC5.49□□□□□ -1.53
POLR2AP24928 RPF2P1-201ENST00000424137 906 ntBASIC5.49□□□□□ -1.53
POLR2AP24928 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.49□□□□□ -1.53
POLR2AP24928 GAPDHP14-201ENST00000450472 937 ntBASIC5.49□□□□□ -1.53
POLR2AP24928 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
POLR2AP24928 HMGB1P3-201ENST00000502802 616 ntBASIC5.49□□□□□ -1.53
POLR2AP24928 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC5.49□□□□□ -1.53
POLR2AP24928 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC5.49□□□□□ -1.53
POLR2AP24928 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.49□□□□□ -1.53
POLR2AP24928 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC5.49□□□□□ -1.53
POLR2AP24928 AL049830.4-201ENST00000555149 351 ntBASIC5.49□□□□□ -1.53
POLR2AP24928 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.49□□□□□ -1.53
POLR2AP24928 AC125257.1-201ENST00000560400 2930 ntBASIC5.49□□□□□ -1.53
POLR2AP24928 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.49□□□□□ -1.53
POLR2AP24928 AC010735.1-201ENST00000567305 1026 ntBASIC5.49□□□□□ -1.53
POLR2AP24928 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC5.49□□□□□ -1.53
POLR2AP24928 AC053481.3-201ENST00000577881 843 ntBASIC5.49□□□□□ -1.53
POLR2AP24928 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC5.49□□□□□ -1.53
POLR2AP24928 PRELID3BP3-201ENST00000584963 545 ntBASIC5.49□□□□□ -1.53
POLR2AP24928 AC105129.3-201ENST00000605455 485 ntBASIC5.49□□□□□ -1.53
POLR2AP24928 AL450489.1-201ENST00000612071 468 ntBASIC5.49□□□□□ -1.53
POLR2AP24928 AC011447.7-201ENST00000624228 1590 ntBASIC5.49□□□□□ -1.53
POLR2AP24928 AC017104.4-201ENST00000636283 1592 ntBASIC5.49□□□□□ -1.53
POLR2AP24928 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
POLR2AP24928 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
POLR2AP24928 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
POLR2AP24928 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
POLR2AP24928 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
POLR2AP24928 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
POLR2AP24928 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
POLR2AP24928 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
POLR2AP24928 AC021146.4-201ENST00000309229 279 ntBASIC5.48□□□□□ -1.53
POLR2AP24928 MIR421-201ENST00000365696 85 ntBASIC5.48□□□□□ -1.53
POLR2AP24928 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC5.48□□□□□ -1.53
POLR2AP24928 COX6CP15-201ENST00000426313 211 ntBASIC5.48□□□□□ -1.53
POLR2AP24928 FO393414.1-201ENST00000428697 1184 ntBASIC5.48□□□□□ -1.53
POLR2AP24928 PHBP16-201ENST00000446318 950 ntBASIC5.48□□□□□ -1.53
POLR2AP24928 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC5.48□□□□□ -1.53
POLR2AP24928 RNU7-125P-201ENST00000458760 62 ntBASIC5.48□□□□□ -1.53
POLR2AP24928 TRBV8-1-201ENST00000481590 279 ntBASIC5.48□□□□□ -1.53
POLR2AP24928 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC5.48□□□□□ -1.53
POLR2AP24928 LAMTOR3P2-201ENST00000504479 232 ntBASIC5.48□□□□□ -1.53
POLR2AP24928 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC5.48□□□□□ -1.53
POLR2AP24928 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.48□□□□□ -1.53
POLR2AP24928 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC5.48□□□□□ -1.53
POLR2AP24928 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.48□□□□□ -1.53
POLR2AP24928 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC5.48□□□□□ -1.53
POLR2AP24928 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC5.48□□□□□ -1.53
POLR2AP24928 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
POLR2AP24928 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC5.48□□□□□ -1.53
POLR2AP24928 AC025884.1-201ENST00000556034 378 ntBASIC5.48□□□□□ -1.53
POLR2AP24928 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC5.48□□□□□ -1.53
POLR2AP24928 PRPF19P1-201ENST00000584766 898 ntBASIC5.48□□□□□ -1.53
POLR2AP24928 NTAN1P1-201ENST00000603150 646 ntBASIC5.48□□□□□ -1.53
POLR2AP24928 AL035411.2-201ENST00000604022 421 ntBASIC5.48□□□□□ -1.53
POLR2AP24928 AP004372.1-201ENST00000604842 844 ntBASIC5.48□□□□□ -1.53
POLR2AP24928 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.48□□□□□ -1.53
POLR2AP24928 AP002360.4-201ENST00000606980 481 ntBASIC5.48□□□□□ -1.53
POLR2AP24928 AC023043.4-201ENST00000612081 449 ntBASIC5.48□□□□□ -1.53
POLR2AP24928 AL355073.2-201ENST00000612106 557 ntBASIC5.48□□□□□ -1.53
POLR2AP24928 AL138478.1-201ENST00000612252 832 ntBASIC5.48□□□□□ -1.53
POLR2AP24928 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC5.48□□□□□ -1.53
POLR2AP24928 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.48□□□□□ -1.53
POLR2AP24928 AC090617.9-201ENST00000623751 147 ntBASIC5.48□□□□□ -1.53
POLR2AP24928 AC017037.3-201ENST00000625016 472 ntBASIC5.48□□□□□ -1.53
POLR2AP24928 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC5.48□□□□□ -1.53
POLR2AP24928 AL158163.1-201ENST00000603915 1649 ntBASIC5.48□□□□□ -1.53
POLR2AP24928 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.48□□□□□ -1.53
POLR2AP24928 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
POLR2AP24928 AC111188.2-201ENST00000529697 1387 ntBASIC5.48□□□□□ -1.53
POLR2AP24928 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.48□□□□□ -1.53
POLR2AP24928 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
POLR2AP24928 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
POLR2AP24928 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.48□□□□□ -1.53
POLR2AP24928 AC093671.1-201ENST00000624981 2929 ntBASIC5.48□□□□□ -1.53
POLR2AP24928 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.48□□□□□ -1.53
POLR2AP24928 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
POLR2AP24928 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
POLR2AP24928 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
POLR2AP24928 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
POLR2AP24928 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.47□□□□□ -1.53
POLR2AP24928 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms