RNA–Protein interactions for RNA: ENST00000604022.1

AL035411.2-201, humanhuman

BASIC

Gene AL035411.2, Length 421 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL035411.2-201ENST00000604022 AEBP2Q6ZN18 517 aaPredicted RBP23.87■■□□□ 1.41
AL035411.2-201ENST00000604022 CHIC1Q5VXU3 224 aa23.36■■□□□ 1.33
AL035411.2-201ENST00000604022 PHF23Q9BUL5 403 aaPredicted RBP20.59■□□□□ 0.89
AL035411.2-201ENST00000604022 SENP3Q9H4L4 574 aaPredicted RBP20.16■□□□□ 0.82
AL035411.2-201ENST00000604022 PLPPR3Q6T4P5 718 aa19■□□□□ 0.63
AL035411.2-201ENST00000604022 FOXD1Q16676 465 aa18.75■□□□□ 0.59
AL035411.2-201ENST00000604022 ADRA2BP18089 450 aa18.17■□□□□ 0.5
AL035411.2-201ENST00000604022 PPP6R1Q9UPN7 881 aa18.16■□□□□ 0.5
AL035411.2-201ENST00000604022 PIAS4Q8N2W9 510 aaPredicted RBP17.73■□□□□ 0.43
AL035411.2-201ENST00000604022 MSH5O43196 834 aa17.19■□□□□ 0.34
AL035411.2-201ENST00000604022 PPP4R3CPQ6ZMV5 832 aa16.8■□□□□ 0.28
AL035411.2-201ENST00000604022 KCNA4P22459 653 aa16.56■□□□□ 0.24
AL035411.2-201ENST00000604022 SCAF1Q9H7N4 1312 aaKnown RBP16.51■□□□□ 0.23
AL035411.2-201ENST00000604022 MAPK8IP2Q13387 824 aaPredicted RBP16.47■□□□□ 0.23
AL035411.2-201ENST00000604022 NCBP3Q53F19 620 aaKnown RBP16.34■□□□□ 0.21
AL035411.2-201ENST00000604022 CNKSR2Q8WXI2 1034 aa16.26■□□□□ 0.19
AL035411.2-201ENST00000604022 NPM3O75607 178 aaKnown RBP16.15■□□□□ 0.18
AL035411.2-201ENST00000604022 DMRT2Q9Y5R5 561 aa16.11■□□□□ 0.17
AL035411.2-201ENST00000604022 RNF216Q9NWF9 866 aaPredicted RBP15.9■□□□□ 0.14
AL035411.2-201ENST00000604022 HOXD11P31277 338 aaPredicted RBP15.8■□□□□ 0.12
AL035411.2-201ENST00000604022 SLC4A1APQ9BWU0 796 aaKnown RBP15.77■□□□□ 0.12
AL035411.2-201ENST00000604022 DCAF8L1A6NGE4 600 aa15.55■□□□□ 0.08
AL035411.2-201ENST00000604022 POTEDQ86YR6 584 aa15.54■□□□□ 0.08
AL035411.2-201ENST00000604022 EHMT2Q96KQ7 1210 aa15.53■□□□□ 0.08
AL035411.2-201ENST00000604022 DNAJC5BQ9UF47 199 aa15.49■□□□□ 0.07
AL035411.2-201ENST00000604022 ZBTB22O15209 634 aa15.25■□□□□ 0.03
AL035411.2-201ENST00000604022 SLC4A2P04920 1241 aa15.22■□□□□ 0.03
AL035411.2-201ENST00000604022 CSRNP3Q8WYN3 585 aa15.22■□□□□ 0.03
AL035411.2-201ENST00000604022 FOXD4L1Q9NU39 408 aa15.17■□□□□ 0.02
AL035411.2-201ENST00000604022 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.14■□□□□ 0.01
AL035411.2-201ENST00000604022 MYCNP04198 464 aaPredicted RBP14.89□□□□□ -0.03
AL035411.2-201ENST00000604022 U3KPZ7 1027 aaPredicted RBP14.89□□□□□ -0.03
AL035411.2-201ENST00000604022 RNF39Q9H2S5 420 aa14.76□□□□□ -0.05
AL035411.2-201ENST00000604022 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.66□□□□□ -0.06
AL035411.2-201ENST00000604022 HNRNPUL2Q1KMD3 747 aaKnown RBP14.66□□□□□ -0.06
AL035411.2-201ENST00000604022 SAMD1Q6SPF0 538 aaPredicted RBP14.63□□□□□ -0.07
AL035411.2-201ENST00000604022 C1QBPQ07021 282 aaKnown RBP14.56□□□□□ -0.08
AL035411.2-201ENST00000604022 ATF5Q9Y2D1 282 aaPredicted RBP14.56□□□□□ -0.08
AL035411.2-201ENST00000604022 ATXN8OSP0DMR3 200 aa14.55□□□□□ -0.08
AL035411.2-201ENST00000604022 SPINK5Q9NQ38 1064 aaPredicted RBP14.49□□□□□ -0.09
AL035411.2-201ENST00000604022 APLP2Q06481 763 aa14.48□□□□□ -0.09
AL035411.2-201ENST00000604022 CAPN15O75808 1086 aa14.43□□□□□ -0.1
AL035411.2-201ENST00000604022 TRHP20396 242 aaPredicted RBP14.4□□□□□ -0.1
AL035411.2-201ENST00000604022 CACNB1Q02641 598 aaPredicted RBP14.37□□□□□ -0.11
AL035411.2-201ENST00000604022 ZNF219Q9P2Y4 722 aaPredicted RBP14.31□□□□□ -0.12
AL035411.2-201ENST00000604022 ABCB7O75027 752 aa14.2□□□□□ -0.14
AL035411.2-201ENST00000604022 POLA2Q14181 598 aa14.14□□□□□ -0.15
AL035411.2-201ENST00000604022 DSG3P32926 999 aa14.1□□□□□ -0.15
AL035411.2-201ENST00000604022 MKRN4PQ13434 485 aaPredicted RBP13.9□□□□□ -0.18
AL035411.2-201ENST00000604022 FBLN2P98095 1184 aa13.88□□□□□ -0.19
AL035411.2-201ENST00000604022 ZBTB12Q9Y330 459 aaPredicted RBP13.83□□□□□ -0.2
AL035411.2-201ENST00000604022 FKBP8Q14318 412 aa13.79□□□□□ -0.2
AL035411.2-201ENST00000604022 OSCARQ8IYS5 282 aa13.69□□□□□ -0.22
AL035411.2-201ENST00000604022 SPDYE4A6NLX3 237 aa13.63□□□□□ -0.23
AL035411.2-201ENST00000604022 ZNF692Q9BU19 519 aaPredicted RBP13.52□□□□□ -0.25
AL035411.2-201ENST00000604022 SPDYE2BA6NHP3 402 aa13.5□□□□□ -0.25
AL035411.2-201ENST00000604022 SPDYE6P0CI01 402 aa13.5□□□□□ -0.25
AL035411.2-201ENST00000604022 SPDYE2Q495Y8 402 aa13.5□□□□□ -0.25
AL035411.2-201ENST00000604022 SSUH2Q9Y2M2 353 aa13.4□□□□□ -0.26
AL035411.2-201ENST00000604022 RBM42Q9BTD8 480 aaKnown RBP13.39□□□□□ -0.27
AL035411.2-201ENST00000604022 PABPN1Q86U42 306 aaKnown RBP eCLIP13.35□□□□□ -0.27
AL035411.2-201ENST00000604022 PROM2Q8N271 834 aa13.34□□□□□ -0.27
AL035411.2-201ENST00000604022 AKT1S1Q96B36 256 aa13.26□□□□□ -0.29
AL035411.2-201ENST00000604022 REM2Q8IYK8 340 aaPredicted RBP13.18□□□□□ -0.3
AL035411.2-201ENST00000604022 FBXO3Q9UK99 471 aa13.17□□□□□ -0.3
AL035411.2-201ENST00000604022 CLEC11AQ9Y240 323 aa13.11□□□□□ -0.31
AL035411.2-201ENST00000604022 SPDYE1Q8NFV5 336 aaPredicted RBP13.09□□□□□ -0.31
AL035411.2-201ENST00000604022 STAG3Q9UJ98 1225 aa13.08□□□□□ -0.32
AL035411.2-201ENST00000604022 PITPNM1O00562 1244 aa13.04□□□□□ -0.32
AL035411.2-201ENST00000604022 VASPP50552 380 aaPredicted RBP13.04□□□□□ -0.32
AL035411.2-201ENST00000604022 PRR29P0C7W0 189 aa12.96□□□□□ -0.33
AL035411.2-201ENST00000604022 MIER1Q8N108 512 aa12.94□□□□□ -0.34
AL035411.2-201ENST00000604022 PLCD3Q8N3E9 789 aa12.94□□□□□ -0.34
AL035411.2-201ENST00000604022 IFNLR1Q8IU57 520 aaPredicted RBP12.89□□□□□ -0.35
AL035411.2-201ENST00000604022 KLHL34Q8N239 644 aa12.85□□□□□ -0.35
AL035411.2-201ENST00000604022 CHRDL2Q6WN34 429 aa12.84□□□□□ -0.35
AL035411.2-201ENST00000604022 PLEKHG5O94827 1062 aa12.82□□□□□ -0.36
AL035411.2-201ENST00000604022 CREBZFQ9NS37 354 aa12.82□□□□□ -0.36
AL035411.2-201ENST00000604022 CHADLQ6NUI6 762 aa12.81□□□□□ -0.36
AL035411.2-201ENST00000604022 FXR2P51116 673 aaKnown RBP eCLIP12.73□□□□□ -0.37
AL035411.2-201ENST00000604022 PRKAR2AP13861 404 aaKnown RBP12.72□□□□□ -0.37
AL035411.2-201ENST00000604022 PIP4P2Q8N4L2 257 aa12.72□□□□□ -0.37
AL035411.2-201ENST00000604022 RTN4Q9NQC3 1192 aaKnown RBP12.72□□□□□ -0.37
AL035411.2-201ENST00000604022 SPOCK2Q92563 424 aa12.7□□□□□ -0.38
AL035411.2-201ENST00000604022 ZBTB47Q9UFB7 747 aaPredicted RBP12.69□□□□□ -0.38
AL035411.2-201ENST00000604022 AMER1Q5JTC6 1135 aaPredicted RBP12.68□□□□□ -0.38
AL035411.2-201ENST00000604022 MNX1P50219 401 aaPredicted RBP12.67□□□□□ -0.38
AL035411.2-201ENST00000604022 FARP1Q9Y4F1 1045 aaPredicted RBP12.61□□□□□ -0.39
AL035411.2-201ENST00000604022 NPM1P06748 294 aaKnown RBP eCLIP12.57□□□□□ -0.4
AL035411.2-201ENST00000604022 NUBP1P53384 320 aa12.56□□□□□ -0.4
AL035411.2-201ENST00000604022 CIZ1Q9ULV3 898 aaPredicted RBP12.55□□□□□ -0.4
AL035411.2-201ENST00000604022 RASEFQ8IZ41 740 aa12.52□□□□□ -0.41
AL035411.2-201ENST00000604022 DCAF8Q5TAQ9 597 aa12.5□□□□□ -0.41
AL035411.2-201ENST00000604022 PKD2Q13563 968 aa12.49□□□□□ -0.41
AL035411.2-201ENST00000604022 FAM212AQ96EL1 285 aa12.47□□□□□ -0.41
AL035411.2-201ENST00000604022 TSPYL2Q9H2G4 693 aaPredicted RBP12.46□□□□□ -0.41
AL035411.2-201ENST00000604022 ECM2O94769 699 aaPredicted RBP12.42□□□□□ -0.42
AL035411.2-201ENST00000604022 GSE1Q14687 1217 aa12.42□□□□□ -0.42
AL035411.2-201ENST00000604022 CD44P16070 742 aaKnown RBP12.36□□□□□ -0.43
AL035411.2-201ENST00000604022 PAK3O75914 559 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms