Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
VGLL1Q99990 RNU6-83P-201ENST00000384568 112 ntBASIC3.75□□□□□ -1.81
VGLL1Q99990 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
VGLL1Q99990 SKINT1L-201ENST00000401057 817 ntBASIC3.75□□□□□ -1.81
VGLL1Q99990 HMGB1P13-201ENST00000406019 642 ntBASIC3.75□□□□□ -1.81
VGLL1Q99990 SNORA77-201ENST00000408716 125 ntBASIC3.75□□□□□ -1.81
VGLL1Q99990 MTND4P22-201ENST00000413116 1169 ntBASIC3.75□□□□□ -1.81
VGLL1Q99990 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC3.75□□□□□ -1.81
VGLL1Q99990 AL513325.1-201ENST00000417716 1034 ntBASIC3.75□□□□□ -1.81
VGLL1Q99990 TMBIM7P-201ENST00000418074 855 ntBASIC3.75□□□□□ -1.81
VGLL1Q99990 SLC35E1P1-201ENST00000419313 864 ntBASIC3.75□□□□□ -1.81
VGLL1Q99990 AC246680.2-201ENST00000422106 389 ntBASIC3.75□□□□□ -1.81
VGLL1Q99990 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
VGLL1Q99990 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.75□□□□□ -1.81
VGLL1Q99990 AL121776.1-201ENST00000429337 372 ntBASIC3.75□□□□□ -1.81
VGLL1Q99990 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC3.75□□□□□ -1.81
VGLL1Q99990 UBE2V1P1-201ENST00000430836 445 ntBASIC3.75□□□□□ -1.81
VGLL1Q99990 RPL7L1P9-201ENST00000431298 745 ntBASIC3.75□□□□□ -1.81
VGLL1Q99990 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC3.75□□□□□ -1.81
VGLL1Q99990 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC3.75□□□□□ -1.81
VGLL1Q99990 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.75□□□□□ -1.81
VGLL1Q99990 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.75□□□□□ -1.81
VGLL1Q99990 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC3.75□□□□□ -1.81
VGLL1Q99990 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC3.75□□□□□ -1.81
VGLL1Q99990 SPRYD7P1-201ENST00000443861 570 ntBASIC3.75□□□□□ -1.81
VGLL1Q99990 AC068135.1-201ENST00000446164 246 ntBASIC3.75□□□□□ -1.81
VGLL1Q99990 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.75□□□□□ -1.81
VGLL1Q99990 HNRNPDLP3-201ENST00000456745 380 ntBASIC3.75□□□□□ -1.81
VGLL1Q99990 TPTE2P5-203ENST00000458118 728 ntBASIC3.75□□□□□ -1.81
VGLL1Q99990 RPS17P2-201ENST00000461663 408 ntBASIC3.75□□□□□ -1.81
VGLL1Q99990 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.75□□□□□ -1.81
VGLL1Q99990 RPL23AP44-201ENST00000482216 473 ntBASIC3.75□□□□□ -1.81
VGLL1Q99990 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC3.75□□□□□ -1.81
VGLL1Q99990 AC010350.1-201ENST00000504908 231 ntBASIC3.75□□□□□ -1.81
VGLL1Q99990 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.75□□□□□ -1.81
VGLL1Q99990 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC3.75□□□□□ -1.81
VGLL1Q99990 HMGB3P13-201ENST00000511263 607 ntBASIC3.75□□□□□ -1.81
VGLL1Q99990 MTHFD2P4-201ENST00000515074 1025 ntBASIC3.75□□□□□ -1.81
VGLL1Q99990 BX510359.5-201ENST00000515651 304 ntBASIC3.75□□□□□ -1.81
VGLL1Q99990 RNU6-1129P-201ENST00000515964 104 ntBASIC3.75□□□□□ -1.81
VGLL1Q99990 RNU6-1004P-201ENST00000516584 111 ntBASIC3.75□□□□□ -1.81
VGLL1Q99990 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC3.75□□□□□ -1.81
VGLL1Q99990 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC3.75□□□□□ -1.81
VGLL1Q99990 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.75□□□□□ -1.81
VGLL1Q99990 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
VGLL1Q99990 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC3.75□□□□□ -1.81
VGLL1Q99990 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
VGLL1Q99990 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.75□□□□□ -1.81
VGLL1Q99990 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC3.75□□□□□ -1.81
VGLL1Q99990 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC3.75□□□□□ -1.81
VGLL1Q99990 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC3.75□□□□□ -1.81
VGLL1Q99990 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.75□□□□□ -1.81
VGLL1Q99990 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3.75□□□□□ -1.81
VGLL1Q99990 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
VGLL1Q99990 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
VGLL1Q99990 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC3.75□□□□□ -1.81
VGLL1Q99990 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC3.75□□□□□ -1.81
VGLL1Q99990 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
VGLL1Q99990 AC110760.3-201ENST00000598794 467 ntBASIC3.75□□□□□ -1.81
VGLL1Q99990 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC3.75□□□□□ -1.81
VGLL1Q99990 AL021707.7-201ENST00000607991 416 ntBASIC3.75□□□□□ -1.81
VGLL1Q99990 AL392048.1-201ENST00000613946 534 ntBASIC3.75□□□□□ -1.81
VGLL1Q99990 AC007204.2-201ENST00000615022 616 ntBASIC3.75□□□□□ -1.81
VGLL1Q99990 uc_338.18-201ENST00000615451 175 ntBASIC3.75□□□□□ -1.81
VGLL1Q99990 AC009090.3-201ENST00000616553 565 ntBASIC3.75□□□□□ -1.81
VGLL1Q99990 MIR6837-201ENST00000620884 64 ntBASIC3.75□□□□□ -1.81
VGLL1Q99990 AP000676.3-201ENST00000623299 569 ntBASIC3.75□□□□□ -1.81
VGLL1Q99990 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
VGLL1Q99990 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
VGLL1Q99990 AC092435.4-201ENST00000623012 4159 ntBASIC3.75□□□□□ -1.81
VGLL1Q99990 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
VGLL1Q99990 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
VGLL1Q99990 MTND4P10-201ENST00000446199 1363 ntBASIC3.75□□□□□ -1.81
VGLL1Q99990 AC111188.2-201ENST00000529697 1387 ntBASIC3.75□□□□□ -1.81
VGLL1Q99990 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
VGLL1Q99990 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
VGLL1Q99990 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
VGLL1Q99990 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
VGLL1Q99990 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
VGLL1Q99990 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
VGLL1Q99990 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
VGLL1Q99990 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
VGLL1Q99990 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
VGLL1Q99990 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
VGLL1Q99990 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC3.74□□□□□ -1.81
VGLL1Q99990 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC3.74□□□□□ -1.81
VGLL1Q99990 RNA5SP435-201ENST00000364044 108 ntBASIC3.74□□□□□ -1.81
VGLL1Q99990 RNA5SP242-201ENST00000364171 118 ntBASIC3.74□□□□□ -1.81
VGLL1Q99990 RNU4-7P-201ENST00000364758 141 ntBASIC3.74□□□□□ -1.81
VGLL1Q99990 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.74□□□□□ -1.81
VGLL1Q99990 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
VGLL1Q99990 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
VGLL1Q99990 SNORD116-1-201ENST00000384335 95 ntBASIC3.74□□□□□ -1.81
VGLL1Q99990 MIR137-201ENST00000385223 102 ntBASIC3.74□□□□□ -1.81
VGLL1Q99990 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.74□□□□□ -1.81
VGLL1Q99990 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
VGLL1Q99990 ERHP2-201ENST00000402323 299 ntBASIC3.74□□□□□ -1.81
VGLL1Q99990 SFR1P1-201ENST00000403720 688 ntBASIC3.74□□□□□ -1.81
VGLL1Q99990 HMGB3P18-201ENST00000406327 590 ntBASIC3.74□□□□□ -1.81
VGLL1Q99990 OR3A2-201ENST00000408891 1076 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms